F4IX26 · F4IX26_ARATH

Function

Catalytic activity

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentapoplast
Cellular Componentchloroplast
Cellular Componentchloroplast envelope
Cellular Componentchloroplast stroma
Cellular Componentchloroplast thylakoid membrane
Cellular Componentcytosol
Cellular Componentcytosolic ribosome
Cellular Componentthylakoid
Cellular Componentthylakoid lumen
Molecular FunctionmRNA binding
Molecular Functionpeptidyl-prolyl cis-trans isomerase activity
Biological Processcysteine biosynthetic process
Biological Processprotein folding
Biological Processprotein peptidyl-prolyl isomerization
Biological Processresponse to abscisic acid
Biological Processresponse to light intensity
Biological Processresponse to mannitol
Biological Processresponse to oxidative stress
Biological Processresponse to salt stress
Biological Processsignal transduction

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    peptidylprolyl isomerase
  • EC number

Gene names

    • Name
      ROC4
    • Synonyms
      cyclophilin 20-3
      , CYP20-3
      , PEPTIDYLPROLYL ISOMERASE ROC4
      , rotamase CYP 4
    • ORF names
      T17J13.1
    • Ordered locus names
      At3g62030

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    F4IX26

Proteomes

Organism-specific databases

Genome annotation databases

PTM/Processing

Proteomic databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain151-308PPIase cyclophilin-type

Sequence similarities

Belongs to the cyclophilin-type PPIase family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    313
  • Mass (Da)
    34,318
  • Last updated
    2011-06-28 v1
  • Checksum
    5571382BA9CA7803
MFRLLLLPYAVGAQQKLLQTPRETKVADAWNIKCQNLLLSKANQQKVFIFNHSMASSSSMQMVHTSRSIAQIGFGVKSQLVSANRTTQSVCFGARSSGIALSSRLHYASPIKQFSGVYATTKHQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGELPLDA

Computationally mapped potential isoform sequences

There are 2 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
P34791CP20C_ARATHCYP20-3260
F4IX28F4IX28_ARATHROC4259

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP002686
EMBL· GenBank· DDBJ
AEE80298.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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