F4IFQ0 · F4IFQ0_ARATH
- ProteinSerine/threonine-protein phosphatase
- GeneBSL3
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1001 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Variants
Variant ID(s) | Position(s) | Change | Description | Clinical significance | Provenance | ||
---|---|---|---|---|---|---|---|
ENSVATH14559335 | 16 | I>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.62) Somatic: No Accession: 2:g.11630234T>C Codon: ATT/ACT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11630234T>C Locations: - p.Ile16Thr (EnsemblPlants:AT2G27210.2) - c.47T>C (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH13428793 | 23 | S>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.75) Somatic: No Accession: 2:g.11630254T>G Codon: TCT/GCT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11630254T>G Locations: - p.Ser23Ala (EnsemblPlants:AT2G27210.2) - c.67T>G (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH01906458 | 35 | Q>E | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (1) Somatic: No Accession: 2:g.11630290C>G Codon: CAA/GAA Consequence type: missense Cytogenetic band: Genomic location: 2:g.11630290C>G Locations: - p.Gln35Glu (EnsemblPlants:AT2G27210.2) - c.103C>G (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH00250904 | 43 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.52) Somatic: No Accession: 2:g.11630314G>A Codon: GCG/ACG Consequence type: missense Cytogenetic band: Genomic location: 2:g.11630314G>A Locations: - p.Ala43Thr (EnsemblPlants:AT2G27210.2) - c.127G>A (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH07900393 | 68 | V>G | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.01) Somatic: No Accession: 2:g.11630390T>G Codon: GTG/GGG Consequence type: missense Cytogenetic band: Genomic location: 2:g.11630390T>G Locations: - p.Val68Gly (EnsemblPlants:AT2G27210.2) - c.203T>G (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH01906467 | 161 | S>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (1) Somatic: No Accession: 2:g.11630811T>A Codon: TCT/ACT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11630811T>A Locations: - p.Ser161Thr (EnsemblPlants:AT2G27210.2) - c.481T>A (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH13428825 | 168 | T>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.24) Somatic: No Accession: 2:g.11630930C>T Codon: ACA/ATA Consequence type: missense Cytogenetic band: Genomic location: 2:g.11630930C>T Locations: - p.Thr168Ile (EnsemblPlants:AT2G27210.2) - c.503C>T (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11630953_C_T | 176 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 2:g.11630953C>T Codon: CCA/TCA Consequence type: missense Cytogenetic band: Genomic location: 2:g.11630953C>T Locations: - p.Pro176Ser (EnsemblPlants:AT2G27210.2) - c.526C>T (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11631172_C_A | 212 | Q>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.59) Somatic: No Accession: 2:g.11631172C>A Codon: CAG/AAG Consequence type: missense Cytogenetic band: Genomic location: 2:g.11631172C>A Locations: - p.Gln212Lys (EnsemblPlants:AT2G27210.2) - c.634C>A (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11631173_A_T | 212 | Q>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.14) Somatic: No Accession: 2:g.11631173A>T Codon: CAG/CTG Consequence type: missense Cytogenetic band: Genomic location: 2:g.11631173A>T Locations: - p.Gln212Leu (EnsemblPlants:AT2G27210.2) - c.635A>T (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH05604119 | 224 | G>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 2:g.11631299G>A Codon: GGT/AGT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11631299G>A Locations: - p.Gly224Ser (EnsemblPlants:AT2G27210.2) - c.670G>A (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11632747_C_A | 391 | A>E | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.26) Somatic: No Accession: 2:g.11632747C>A Codon: GCA/GAA Consequence type: missense Cytogenetic band: Genomic location: 2:g.11632747C>A Locations: - p.Ala391Glu (EnsemblPlants:AT2G27210.2) - c.1172C>A (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH14559340 | 457 | T>M | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.13) Somatic: No Accession: 2:g.11633291C>T Codon: ACG/ATG Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633291C>T Locations: - p.Thr457Met (EnsemblPlants:AT2G27210.2) - c.1370C>T (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11633357_C_T | 479 | S>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.29) Somatic: No Accession: 2:g.11633357C>T Codon: TCA/TTA Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633357C>T Locations: - p.Ser479Leu (EnsemblPlants:AT2G27210.2) - c.1436C>T (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH00250913 | 512 | I>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.43) Somatic: No Accession: 2:g.11633456T>C Codon: ATT/ACT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633456T>C Locations: - p.Ile512Thr (EnsemblPlants:AT2G27210.2) - c.1535T>C (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11633548_C_G | 515 | T>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.51) Somatic: No Accession: 2:g.11633548C>G Codon: ACA/AGA Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633548C>G Locations: - p.Thr515Arg (EnsemblPlants:AT2G27210.2) - c.1544C>G (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11633550_A_G | 516 | S>G | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.12) Somatic: No Accession: 2:g.11633550A>G Codon: AGC/GGC Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633550A>G Locations: - p.Ser516Gly (EnsemblPlants:AT2G27210.2) - c.1546A>G (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11633552_C_G | 516 | S>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.15) Somatic: No Accession: 2:g.11633552C>G Codon: AGC/AGG Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633552C>G Locations: - p.Ser516Arg (EnsemblPlants:AT2G27210.2) - c.1548C>G (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH05604133 | 551 | L>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.08) Somatic: No Accession: 2:g.11633655C>G Codon: CTT/GTT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633655C>G Locations: - p.Leu551Val (EnsemblPlants:AT2G27210.2) - c.1651C>G (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH13428830 | 556 | R>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.19) Somatic: No Accession: 2:g.11633671G>A Codon: CGT/CAT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633671G>A Locations: - p.Arg556His (EnsemblPlants:AT2G27210.2) - c.1667G>A (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH00250916 | 574 | D>E | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.39) Somatic: No Accession: 2:g.11633726T>A Codon: GAT/GAA Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633726T>A Locations: - p.Asp574Glu (EnsemblPlants:AT2G27210.2) - c.1722T>A (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH13428831 | 583 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.21) Somatic: No Accession: 2:g.11633751C>T Codon: CCT/TCT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633751C>T Locations: - p.Pro583Ser (EnsemblPlants:AT2G27210.2) - c.1747C>T (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11633755_C_G | 584 | A>G | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.42) Somatic: No Accession: 2:g.11633755C>G Codon: GCA/GGA Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633755C>G Locations: - p.Ala584Gly (EnsemblPlants:AT2G27210.2) - c.1751C>G (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11633757_G_T | 585 | G>W | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 2:g.11633757G>T Codon: GGG/TGG Consequence type: missense Cytogenetic band: Genomic location: 2:g.11633757G>T Locations: - p.Gly585Trp (EnsemblPlants:AT2G27210.2) - c.1753G>T (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH14559344 | 647 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.09) Somatic: No Accession: 2:g.11634065C>T Codon: CCG/TCG Consequence type: missense Cytogenetic band: Genomic location: 2:g.11634065C>T Locations: - p.Pro647Ser (EnsemblPlants:AT2G27210.2) - c.1939C>T (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11634457_G_A | 684 | R>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.13) Somatic: No Accession: 2:g.11634457G>A Codon: CGT/CAT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11634457G>A Locations: - p.Arg684His (EnsemblPlants:AT2G27210.2) - c.2051G>A (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11635082_A_G | 815 | I>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 2:g.11635082A>G Codon: ATT/GTT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11635082A>G Locations: - p.Ile815Val (EnsemblPlants:AT2G27210.2) - c.2443A>G (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
ENSVATH05604148 | 967 | H>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.44) Somatic: No Accession: 2:g.11635998A>G Codon: CAT/CGT Consequence type: missense Cytogenetic band: Genomic location: 2:g.11635998A>G Locations: - p.His967Arg (EnsemblPlants:AT2G27210.2) - c.2900A>G (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: | |||||||
tmp_2_11636151_C_T | 992 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.27) Somatic: No Accession: 2:g.11636151C>T Codon: CCA/CTA Consequence type: missense Cytogenetic band: Genomic location: 2:g.11636151C>T Locations: - p.Pro992Leu (EnsemblPlants:AT2G27210.2) - c.2975C>T (EnsemblPlants:AT2G27210.2) Source type: large scale study Cross-references: |