F4I642 · F4I642_ARATH
- ProteinUbiquitin-specific protease 15
- GeneUBP15
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids928 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | membrane | |
Cellular Component | nucleus | |
Molecular Function | cysteine-type deubiquitinase activity | |
Molecular Function | metal ion binding | |
Biological Process | cell division | |
Biological Process | flower development | |
Biological Process | fruit development | |
Biological Process | leaf development | |
Biological Process | protein deubiquitination | |
Biological Process | proteolysis | |
Biological Process | root development | |
Biological Process | shoot system development |
Keywords
- Molecular function
- Ligand
Protein family/group databases
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionF4I642
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transmembrane | 7-27 | Helical | ||||
Sequence: ADIPILFLVLVVLPVVAYILL |
Keywords
- Cellular component
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for domain, compositional bias, region.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 130-167 | MYND-type | ||||
Sequence: CARCFGPAKTRCSRCKSVRYCSGKCQIIHWRVAHKDEC | ||||||
Compositional bias | 226-241 | Polar residues | ||||
Sequence: DITPQINTQGRKSVGK | ||||||
Region | 226-301 | Disordered | ||||
Sequence: DITPQINTQGRKSVGKQHSSKANRESCRRDSATVFDSSDEAASAGGDNKTSHIKHKSRGNSYAAETNPRRHSVDSS | ||||||
Compositional bias | 243-260 | Basic and acidic residues | ||||
Sequence: HSSKANRESCRRDSATVF | ||||||
Compositional bias | 285-301 | Polar residues | ||||
Sequence: NSYAAETNPRRHSVDSS | ||||||
Region | 317-366 | Disordered | ||||
Sequence: SHKHENNLGVRSSFGCPNTQYPSNGTRTATLPRTGINKSGEQSCTETSKK | ||||||
Compositional bias | 327-366 | Polar residues | ||||
Sequence: RSSFGCPNTQYPSNGTRTATLPRTGINKSGEQSCTETSKK | ||||||
Domain | 442-748 | USP | ||||
Sequence: RGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHVMMLRESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYMRS | ||||||
Compositional bias | 754-792 | Basic and acidic residues | ||||
Sequence: RGEHNGKAPVHHSQPRNEMKEQRKPVNRFKPRADHKNTE | ||||||
Region | 754-797 | Disordered | ||||
Sequence: RGEHNGKAPVHHSQPRNEMKEQRKPVNRFKPRADHKNTESSSSE |
Sequence similarities
Belongs to the peptidase C19 family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length928
- Mass (Da)104,063
- Last updated2011-06-28 v1
- Checksum0D46BBF0CDB0670C
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q9FPS9 | UBP15_ARATH | UBP15 | 924 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 226-241 | Polar residues | ||||
Sequence: DITPQINTQGRKSVGK | ||||||
Compositional bias | 243-260 | Basic and acidic residues | ||||
Sequence: HSSKANRESCRRDSATVF | ||||||
Compositional bias | 285-301 | Polar residues | ||||
Sequence: NSYAAETNPRRHSVDSS | ||||||
Compositional bias | 327-366 | Polar residues | ||||
Sequence: RSSFGCPNTQYPSNGTRTATLPRTGINKSGEQSCTETSKK | ||||||
Compositional bias | 754-792 | Basic and acidic residues | ||||
Sequence: RGEHNGKAPVHHSQPRNEMKEQRKPVNRFKPRADHKNTE |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CP002684 EMBL· GenBank· DDBJ | AEE29543.1 EMBL· GenBank· DDBJ | Genomic DNA |