F4I0A4 · F4I0A4_ARATH
- ProteinCalpain-type cysteine protease family
- GeneDEK1
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids2179 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
Features
Showing features for active site.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Active site | 1789 | |||||
Sequence: C | ||||||
Active site | 1947 | |||||
Sequence: H | ||||||
Active site | 1967 | |||||
Sequence: N |
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | endoplasmic reticulum | |
Cellular Component | plasma membrane | |
Molecular Function | calcium-dependent cysteine-type endopeptidase activity | |
Molecular Function | cysteine-type endopeptidase activity | |
Biological Process | cell fate specification | |
Biological Process | embryo development ending in seed dormancy | |
Biological Process | proteolysis | |
Biological Process | regulation of adaxial/abaxial pattern formation | |
Biological Process | regulation of leaf development | |
Biological Process | regulation of meristem structural organization | |
Biological Process | regulation of multicellular organism growth |
Keywords
- Molecular function
Protein family/group databases
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionF4I0A4
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transmembrane | 6-33 | Helical | ||||
Sequence: RGVLLACVISGTLFTVFGSGSFWILWAV | ||||||
Transmembrane | 58-83 | Helical | ||||
Sequence: LDILCGVLSLFAWIVVVSPIAILIGW | ||||||
Transmembrane | 95-118 | Helical | ||||
Sequence: IIGLAIIMAGTALLLAFYSIMLWW | ||||||
Transmembrane | 130-151 | Helical | ||||
Sequence: LLLLLGVALLCAYELCAVYVTA | ||||||
Transmembrane | 163-185 | Helical | ||||
Sequence: GFFFGVSAIALAINMLFICRMVF | ||||||
Transmembrane | 238-257 | Helical | ||||
Sequence: LLYLGSLVVLLAYSVLYGLT | ||||||
Transmembrane | 263-286 | Helical | ||||
Sequence: WLGGITSAAVIVLDWNIGACLYGF | ||||||
Transmembrane | 293-314 | Helical | ||||
Sequence: VLALFVAGISRLFLICFGIHYW | ||||||
Transmembrane | 618-636 | Helical | ||||
Sequence: AWGLFSLVFILETIIVAIF | ||||||
Transmembrane | 656-676 | Helical | ||||
Sequence: SVLLLSPVVCSIMAFLRSLQV | ||||||
Transmembrane | 688-706 | Helical | ||||
Sequence: YGFVAWLLSTSVGLSLSFL | ||||||
Transmembrane | 712-734 | Helical | ||||
Sequence: LLGISLTVPLMAACLSIAVPIWM | ||||||
Transmembrane | 762-784 | Helical | ||||
Sequence: FILWICVVLFAGSVISLGAIISA | ||||||
Transmembrane | 811-837 | Helical | ||||
Sequence: YLGWAMSSGIALVVTAILPIVSWFATY | ||||||
Transmembrane | 844-863 | Helical | ||||
Sequence: AVCLMIFSVVLVAFCGTSYL | ||||||
Transmembrane | 879-900 | Helical | ||||
Sequence: FLAALLPLACIPALLSLCCGMV | ||||||
Transmembrane | 912-933 | Helical | ||||
Sequence: GVYVFFSIGLLLLFGAIAAVIA | ||||||
Transmembrane | 939-961 | Helical | ||||
Sequence: IGVSFLLVLFLMVVTIGVIHLWA | ||||||
Transmembrane | 973-992 | Helical | ||||
Sequence: SFVCFLALLLGLAAFLLGWH | ||||||
Transmembrane | 1004-1026 | Helical | ||||
Sequence: YFTFLSLLAGRALAVLLSPPIVV | ||||||
Transmembrane | 1047-1066 | Helical | ||||
Sequence: VSAAFLVLYGIALATEGWGV | ||||||
Transmembrane | 1072-1094 | Helical | ||||
Sequence: IYPPFAGAAVSAITLVVAFGFAV | ||||||
Transmembrane | 1393-1411 | Helical | ||||
Sequence: TYFYILQVFFLMMLINGEL |
Keywords
- Cellular component
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 363-393 | Disordered | ||||
Sequence: RRKEQNSSSSSSDGCGSSIKRSSSIDAGHTG | ||||||
Compositional bias | 367-393 | Polar residues | ||||
Sequence: QNSSSSSSDGCGSSIKRSSSIDAGHTG | ||||||
Region | 405-442 | Disordered | ||||
Sequence: CTADNLTRTGSSQEGINSDKSEESGRPSLGLRSSSCRS | ||||||
Domain | 1723-2025 | Calpain catalytic | ||||
Sequence: QFTDQEFPPNDRSLFVDTQNPPSKLQVVSEWMRPDSIVKENGSDSRPCLFSGDANPSDVCQGRLGDCWFLSAVAVLTEVSRISEVIITPEYNEEGIYTVRFCIQGEWVPVVIDDWIPCESPGKPAFATSRKLNELWVSMVEKAYAKLHGSYEALEGGLVQDALVDLTGGAGEEIDLRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGSDVHVSSSGIVQGHAYSVLQVREVDGHRLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKEGIFWMSWQDFQIHFRSIYVCRVY |
Sequence similarities
Belongs to the peptidase C2 family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length2,179
- Mass (Da)241,729
- Last updated2011-06-28 v1
- ChecksumCC1942CD52C112A9
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q8RVL2 | DEK1_ARATH | DEK1 | 2151 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 367-393 | Polar residues | ||||
Sequence: QNSSSSSSDGCGSSIKRSSSIDAGHTG |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CP002684 EMBL· GenBank· DDBJ | AEE33236.1 EMBL· GenBank· DDBJ | Genomic DNA |