F1REQ6 · F1REQ6_DANRE

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular Functionzinc ion binding
Biological Processcilium assembly
Biological ProcessKupffer's vesicle development
Biological Processmelanosome transport
Biological Processneural retina development

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Prickle homolog 2b
    • Prickle-like protein 2 isoform X1

Gene names

    • Name
      prickle2b
    • Synonyms
      cb886
      , im:7138215
      , pk2
      , prickle2

Organism names

  • Taxonomic identifier
  • Strain
    • Tuebingen
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    F1REQ6
  • Secondary accessions
    • A0A8M2B1U8

Proteomes

Organism-specific databases

PTM/Processing

Proteomic databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain, compositional bias, region.

TypeIDPosition(s)Description
Domain14-122PET
Domain124-188LIM zinc-binding
Domain189-249LIM zinc-binding
Compositional bias310-324Polar residues
Region310-357Disordered
Region423-453Disordered
Region500-534Disordered
Compositional bias510-534Polar residues
Region646-745Disordered
Compositional bias668-684Basic residues
Compositional bias700-717Basic and acidic residues
Region813-840Disordered
Compositional bias825-840Basic residues

Sequence similarities

Belongs to the prickle / espinas / testin family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    840
  • Mass (Da)
    94,816
  • Last updated
    2011-05-03 v1
  • Checksum
    251D97950ED504D5
MPLEMEKTVTKLMYDFQRNSTSDDDSGCALEEYAWVPPGLKPEQVHQYYSSLPEDKVPYVNSPGEKYRIKQLLHQLPPHDNEVRYCNSLDDEEKRELKLFSNQRKRENLGRGNVRPFPVTMTGAICEQCGGQINGGDIAVFASRAGHGVCWHPQCFVCSMCDELLVDLIYFYQDGKIFCGRHHAERLKPRCSACDEIILADECTEAEGRHWHMKHFCCFECETVLGGQRYIMKEGRPYCCTCFESLYAEYCDSCGEHIGIDQGQMTYDGQHWHATEACFSCARCKKSLLGRPFLPKQGQIFCSRACSVGDDQNGSDSSDSAFQSARSREARRSSSKSNKSSTGGSGGDGHQSGKASAMRFSADVDPLSLQMDLLSLSSQTPSLNRESPSWKTQAEMFGYEGRNELSTNPLHLLSQCNIRTSYSSNLSPGHLSDPRPKEPASSKRPPVSALKGKSLNENWFQQGPEDYYPPALRTQASFNEVPHNSFMDKRSVSLHVFQREKEKDVGPQMSRSRNPISALGFSEQLTPLEQTPRGSMESLALSNATGTSADGGSKRQEHLSRFSMPDLSKDSGMNVSEKSNMGTLNSSVQFHSSESLRSLNSAQPYLELEAPVQVRFPVQYPREPSGINALPPGFAYQEEDRVSLVSNANNARLPPMSERTRRRSIDHEEPRRRHHHHRSRRSRRSRSDNALNLVAERRPAPKRSQLHAREDYDQFPLPRGSRDTYGSGRLRQQPFRPCPRTTSDLTLQNPALHRHQGPYSWDQYDYNDDWCSTCSSSSESEDEGYFLGEPIPRPIQLRHMTSEELLRKYNSSGLGASGQFGSRGQLHMRKRRKSKNCIIS

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
Q7ZZC4Q7ZZC4_DANREprickle2b840

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias310-324Polar residues
Compositional bias510-534Polar residues
Compositional bias668-684Basic residues
Compositional bias700-717Basic and acidic residues
Compositional bias825-840Basic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
BX000993
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
BX511159
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CR450834
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp