F1R4Z6 · F1R4Z6_DANRE

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Cellular Componenttranscription regulator complex
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Biological Processendocrine pancreas development
Biological Processinner ear development
Biological Processregulation of transcription by RNA polymerase II
Biological Processtype B pancreatic cell development

Names & Taxonomy

Protein names

  • Submitted names
    • Dachshund b

Gene names

    • Name
      dachb
    • Synonyms
      zgc:136530

Organism names

  • Taxonomic identifier
  • Strain
    • Tuebingen
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    F1R4Z6
  • Secondary accessions
    • A0A8M1P7P0

Proteomes

    • Identifier
    • Component
      Alternate scaffold 1, Chromosome 1

Organism-specific databases

Subcellular Location

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain, region, compositional bias, coiled coil.

TypeIDPosition(s)Description
Domain48-145SKI/SNO/DAC
Region145-164Disordered
Region232-251Disordered
Compositional bias316-365Polar residues
Region316-368Disordered
Coiled coil441-514

Sequence similarities

Belongs to the DACH/dachshund family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    567
  • Mass (Da)
    63,134
  • Last updated
    2011-05-03 v1
  • Checksum
    C14B27976D72D832
MTTMAVPATLPVHSGTSAVSGKLFRTEPFFSSPAEAPRIINSLPSGGTTNECKIVEVHGVKVASFSVDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDINPVVCTVEQVRVLRGLGAIQPGVNRCKLISRKDFEALYNDCTNASSRPGRPPKRSYGASVQESPRILHHRANLLSPALLSPTGLTTAAMAEALKIQKMKMMMNLHKTHNGSEFDSDELNSNAGTVCSTLSWEREKHSSPASEKTQHSLNNSQLNSLQHTHLLANRLELPFMMMPHPLLPVGLPPASVAMAMNQMNHLNTIANMVASAQVHSPVSRPTSAIKQERFEESPSLTPSVEGIVSQKTEPSPQQSSSVPSSPTHPYTHSPLKTAYDAHDEQRETDSALHVNRLSNDRVEQNAVKPALFEKVPAQTFPSGFPASLLFTDGLSSVETLLTNVQGLLKVALENARLQEKQLQQERRELKMELYREREMRESLERQLTSELRTRATIQRRLKKEKKAKRRLQEALEYESKRRGQIEQALQQATSSDSLTHDPISLEMETERCRSPEDNCLLQESRTYTKNPIIY

Computationally mapped potential isoform sequences

There are 2 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A8M9PNY7A0A8M9PNY7_DANREdachb377
A0A8M3B3U2A0A8M3B3U2_DANREdachb566

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias316-365Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AL935188
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
AL953910
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp