F1MMD5 · F1MMD5_BOVIN

  • Protein
    X-ray repair cross complementing 6
  • Gene
    XRCC6
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    4/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentDNA-dependent protein kinase complex
Cellular ComponentDNA-dependent protein kinase-DNA ligase 4 complex
Cellular ComponentKu70:Ku80 complex
Cellular Componentnucleolus
Cellular Componentnucleoplasm
Cellular Componentprotein-DNA complex
Cellular Componenttranscription regulator complex
Molecular Function5'-deoxyribose-5-phosphate lyase activity
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular Functioncyclin binding
Molecular Functiondamaged DNA binding
Molecular FunctionDNA end binding
Molecular FunctionDNA helicase activity
Molecular Functiondouble-stranded telomeric DNA binding
Molecular Functionprotein-containing complex binding
Molecular Functionscaffold protein binding
Molecular Functiontelomeric DNA binding
Molecular Functiontranscription cis-regulatory region binding
Biological Processactivation of innate immune response
Biological Processcellular response to gamma radiation
Biological ProcessDNA recombination
Biological Processdouble-strand break repair via classical nonhomologous end joining
Biological Processdouble-strand break repair via nonhomologous end joining
Biological Processnegative regulation of DNA-templated transcription
Biological Processpositive regulation of protein kinase activity
Biological Processpositive regulation of transcription by RNA polymerase II
Biological Processregulation of smooth muscle cell proliferation
Biological Processtelomere maintenance

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Submitted names
    • X-ray repair cross complementing 6

Gene names

    • Name
      XRCC6

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • Hereford
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Laurasiatheria > Artiodactyla > Ruminantia > Pecora > Bovidae > Bovinae > Bos

Accessions

  • Primary accession
    F1MMD5

Proteomes

Organism-specific databases

PTM/Processing

Proteomic databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region583-604Disordered
Compositional bias584-604Basic and acidic residues
Domain620-654SAP

Sequence similarities

Belongs to the ku70 family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    657
  • Mass (Da)
    75,071
  • Last updated
    2024-05-29 v3
  • Checksum
    22CD01C3C3ED9830
MKVAQSCLTLCDPHGLYSPRNSPGQNTGASSRSLLQGIFPTQGSNPGLPDCRPILYQLSHQGSPRHFYSGPALVDGDYSYSGRDSLIFLVDASRAMFESQDEDELTPFDMSIQCIRSVYTNKIISSNRDLLAVVFYGTKKDKNSVNFKNIYVLQELDNPGVKRVQELDKFKGQEGKKYFEDQIGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDDPHGDDSAKASRARTKAGDLRDTGIFLDLMHLKKRGGFDTSLFYRDVIIAENEDIGIHFEESSKLEDLLRKVRAKETRKRVLSRLKLKLNKDVTLTVGIYNMVQKAYRPPPVRLYRETNEPVKTKTRTFNVNTGSLLLPSDTKRSQTYSHRQIVLEKEETEELKRFDEPGFILIGFKPLMMLKKHHYLRHSLFVYPEESLINGSSTLFSALLTKCLEKEVMAVCRYTPRRNSPPCFVALVPQEEELDDQKIQVAPPGFQLVFLPYADDKRKVPFTEKVMANPEQVDKMKAIVQKLRFKYRSDSFENPVLQQHFRNMEALALDLMEPEQAVDLTLPKTEVMDKRLGSLVDEFKELVYPPDYNPEGKVTKRKKDDESYGSKRPKVELSEEELKAHVSKGTLGKLTVPALKEACRMYGLKGGLKKQELLDVLTEHFQKA

Computationally mapped potential isoform sequences

There are 2 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0AAA9T765A0AAA9T765_BOVINXRCC6560
A0AAA9TL89A0AAA9TL89_BOVINXRCC6627

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias584-604Basic and acidic residues

Keywords

Genome annotation databases

Similar Proteins

Disclaimer

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