E5KFC8 · E5KFC8_9SPER

  • Protein
    DNA-directed RNA polymerase
  • Gene
    rpoB
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    2/5

Function

function

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

Catalytic activity

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentchloroplast
Cellular ComponentDNA-directed RNA polymerase complex
Molecular FunctionDNA binding
Molecular FunctionDNA-directed 5'-3' RNA polymerase activity
Molecular Functionribonucleoside binding
Biological ProcessDNA-templated transcription

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA-directed RNA polymerase
  • EC number
  • Alternative names
    • PEP

Gene names

    • Name
      rpoB

Encoded on

  • Chloroplast

Organism names

  • Taxonomic identifier
  • Organism
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Pinopsida > Pinidae > Conifers I > Pinales > Pinaceae > Picea

Accessions

  • Primary accession
    E5KFC8

Subcellular Location

Keywords

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain11-246DNA-directed RNA polymerase subunit 2 hybrid-binding

Sequence similarities

Belongs to the RNA polymerase beta chain family.

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    246
  • Mass (Da)
    27,342
  • Last updated
    2011-02-08 v1
  • Checksum
    A2232D51561F8087
AALDSGSVAIATQEGRIEYIDAVNITSSVNGDTVRTELVIYQRSNTNTCTHQKPQVRQGECVKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAILISERLVYEDIYTSFHIVRYRIEICMTSQGPERITREIPHLDAHSLRHLDENGLVMLGSWIETGDVLVGKLTPQTTEESLCVPEGRLLQTIFGIEVSTARENCLRTPIGGRGRVIDVRWINRVDDSGDNAETVHVYISQKRKIQV

Features

Showing features for non-terminal residue.

TypeIDPosition(s)Description
Non-terminal residue1
Non-terminal residue246

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
HQ114796
EMBL· GenBank· DDBJ
ADR57468.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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