E1CI79 · E1CI79_DIOJA

Function

function

Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentchloroplast
Molecular FunctionRNA binding
Biological ProcessmRNA processing
Biological ProcesstRNA processing

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Maturase K

Gene names

    • Name
      matK

Encoded on

  • Chloroplast

Organism names

  • Taxonomic identifier
  • Strain
    • Djaponi20
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Dioscoreales > Dioscoreaceae > Dioscorea

Accessions

  • Primary accession
    E1CI79

Subcellular Location

Keywords

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain3-321Maturase MatK N-terminal
Domain349-459Domain X

Sequence similarities

Belongs to the intron maturase 2 family. MatK subfamily.

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    503
  • Mass (Da)
    59,823
  • Last updated
    2010-11-30 v1
  • Checksum
    7A842DDA6F42D8E7
QRHFLFLYPLLFQEYIYTLAHDHGLNGSIFVEILDYDNKSSSVLVKHLITRMYQQNYLIYSADDSNQNRIVGHNNFFYSQMISEGFAVSMEIPFLLRLGSSLEEKEIPKSQNLRSIHSIFPFLEDKSSHLNYVSDILIPHPIHLEILVQILQCWTQDVSSLHLLRFFLHEYHNSNSFITQKKPIYVISISKENKRFFRFLYNSYVFECEFVLVFFHKQSSYLRSRSSGVFLERTHFYGKMGHFLVVCCNYFQKAQWFFKDPFLHYVRYQGKAILVSKGTRLLMRKWGSYLVNFWQYYFQFWSHPHRIHINQLSNYSFCFLGYLSNVLINPSMVRSQMLENSFVIDTLTKKFDTRVSVIALIRSLSKAKFCTISGHPISKSIWTNLSDLDIIHRFGWICRNLSHYHSGSSKKQSLYRIKYILRISCARTLARKHKSRVRAFLQRLGSGLLQEFFTEEEEILSLIFPQALFRSHTGRIWYLDIICINDLRNLMIDHKIKPYNECK

Features

Showing features for non-terminal residue.

TypeIDPosition(s)Description
Non-terminal residue1

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AB557667
EMBL· GenBank· DDBJ
BAJ13290.1
EMBL· GenBank· DDBJ
Genomic DNA
AB624362
EMBL· GenBank· DDBJ
BAL03780.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

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