D8QNI1 · CSPLH_SELML

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmembrane
Cellular Componentplasma membrane

Names & Taxonomy

Protein names

  • Recommended name
    CASP-like protein 5A1
  • Short names
    SmCASPL5A1

Gene names

    • ORF names
      SELMODRAFT_270224

Organism names

Accessions

  • Primary accession
    D8QNI1

Proteomes

Genome annotation databases

Subcellular Location

Cell membrane
; Multi-pass membrane protein

Features

Showing features for topological domain, transmembrane.

TypeIDPosition(s)Description
Topological domain1-45Cytoplasmic
Transmembrane46-66Helical
Topological domain67Extracellular
Transmembrane68-88Helical
Topological domain89-102Cytoplasmic
Transmembrane103-123Helical
Topological domain124-151Extracellular
Transmembrane152-172Helical
Topological domain173-176Cytoplasmic

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00004186821-176CASP-like protein 5A1

Interaction

Subunit

Homodimer and heterodimers.

Protein-protein interaction databases

Family & Domains

Sequence similarities

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    176
  • Mass (Da)
    18,871
  • Last updated
    2010-10-05 v1
  • Checksum
    5155A5CFD33F6850
MDASHPAVYPVGVPPTAVDPPPRVRMKDYEGMPSTLGGLVLRSGQFACAVTALSIMISIPDFSSVTAFCYLVAAMALQLLWSVSLAVVDGYALLLRRTLHNPVLLSLLVIGDWVTSTLSLAAACSSAGITVLIDSDLAQCAHNHCGRYEAAVAMAFLTWFLVSLSFFFSFWLLATR

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
GL377565
EMBL· GenBank· DDBJ
EFJ38105.1
EMBL· GenBank· DDBJ
Genomic DNA
FE454478
EMBL· GenBank· DDBJ
-mRNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

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