D7KEU5 · D7KEU5_ARALL

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentnucleoplasm
Molecular Functioncalmodulin binding
Molecular FunctionDNA binding
Molecular Functionmetal ion binding
Molecular FunctionmRNA binding
Molecular FunctionN6-methyladenosine-containing RNA reader activity
Molecular FunctionRNA endonuclease activity
Biological ProcessmRNA 3'-end processing
Biological ProcessmRNA splicing, via spliceosome
Biological Processpositive regulation of plant-type hypersensitive response
Biological Processregulation of mRNA splicing, via spliceosome
Biological Processregulation of salicylic acid mediated signaling pathway
Biological Processresponse to oxidative stress

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Zinc finger (CCCH-type) family protein

Gene names

    • ORF names
      ARALYDRAFT_890588

Organism names

  • Taxonomic identifier
  • Strain
    • cv. MN47
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    D7KEU5

Proteomes

Genome annotation databases

Subcellular Location

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, domain, zinc finger, compositional bias.

Type
IDPosition(s)Description
Region1-38Disordered
Domain60-87C3H1-type
Zinc finger60-87C3H1-type
Domain114-141C3H1-type
Zinc finger114-141C3H1-type
Region181-233Disordered
Domain237-372YTH
Region392-448Disordered
Compositional bias412-432Acidic residues
Region541-631Disordered
Compositional bias585-600Polar residues

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    631
  • Mass (Da)
    70,024
  • Last updated
    2010-08-10 v1
  • Checksum
    B59431D9043F1A68
MEDADGLSFDFEGGLDSGPAQPSASVPVAPPDNSSSAAVNVAPTYDHSSATVAGAGRGRSFRQTVCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTSYNYGPNRFYQPRNVAPQLQDKPQGQVLTQGQPQEAGNLQQQQQQQPQQSQHQVSQTQIPNPADQTNRTSHPLPQGVNRYFVVKSCNRENFELSVQQGVWATQRSNESKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSRIGSYIGGGNWKHEHGTAQYGRNFSVKWLKLCELSFHKTRNLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAISIAAEAKREEEKAKGVNPESRAENPDIVPFEDNEEEEEEEDESEEEEESMAGGPQGRGRGRGMMWPPQMPLGRGIRPMPGMGGFPLGVMGPGDAFPYGPGGYNGMPDPFGMGPRPFGPYGPRFGGDFRGPVPGMMFPGRPPQQFPHGGYGMMGGGRGPHMGGMGNAPRGGRPMYYPPATSSARPGPTNRKTPERSDERGVGADQQNQDTSHDMEQFEVGNSLRNEESESEDEDEAPRRSRHGEGKKRR

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias412-432Acidic residues
Compositional bias585-600Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
GL348713
EMBL· GenBank· DDBJ
EFH69877.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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