D6MUD7 · D6MUD7_DANRE

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcollagen trimer
Cellular Componentcollagen-containing extracellular matrix
Cellular Componentextracellular space
Molecular Functionextracellular matrix structural constituent conferring tensile strength
Biological Processglomerular basement membrane development

Names & Taxonomy

Protein names

  • Submitted names
    • Collagen type V alpha-3b
    • Collagen, type V, alpha 3b precursor

Gene names

    • Name
      col5a3b
    • Synonyms
      COL5A3b

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    D6MUD7

Proteomes

Organism-specific databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for signal, chain.

Type
IDPosition(s)Description
Signal1-26
ChainPRO_503503522527-1723

Family & Domains

Features

Showing features for compositional bias, region, domain.

Type
IDPosition(s)Description
Compositional bias314-338Basic and acidic residues
Region314-400Disordered
Region433-1463Disordered
Compositional bias488-504Basic and acidic residues
Compositional bias679-693Basic and acidic residues
Compositional bias1249-1269Pro residues
Compositional bias1433-1447Pro residues
Domain1494-1722Fibrillar collagen NC1

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,723
  • Mass (Da)
    171,556
  • Last updated
    2010-07-13 v1
  • Checksum
    115D33D3E39B5303
MKMKSYRISGVSSLLMALFLQNTTLAANPIDVLKVLDLSESMEGVSLEAGLCSSRRGSEEADLAYKIDKKIQVSVPTSQLFPDSEFPVDFSVLLTVRARRGAQCFLLSVYDSEGVQQLGVELGRSPVFLYEDQSGRPSPDLYPIFKKINLADGKWHRVAYSVEGQKVTLYLDCQKVATLDLPRGPEPKVSTAGVTVFGTRLLDEEVFEGEIQQLLISPDPGAAADYCHTHIPDCDSALTYNSLSLDPVEVNRPQRKPVEEEFEDDLYSDLYSDLPNADQNSTEYELLEYEDSENGTEYVKEYTEYDEYVEYEYRPAERQDQHFSSQSRGPEKGEKGEPAVVGEGTMVTGPPGLPGVEGPQGERGPTGPPGRIGDPGDPGPEGRQGLAGADGIPGPPGNLLMLPFQSGGDARLGPVISAQEAQAQAILQHTKLSLKGPPGPLGLTGRPGPLGSPGPRGLKGDHGLTGPPGPRGVLGAPGQNGKPGKRGRGGMDGGRGEPGETGVKGDRGFDGLPGLPGNKGHRGDTGKKGPVGPPGAPGEKGSDGQPGPRGQSGEPGLAGLTGQRGLPGPPGQQGIRGIDGVQGSKGNLGPPGEPGAPGQQGNPGFQGFPGPQGPVGVPGEKGPQGKKGMKGLPGVDGPPGHPGREGPPGEKGLPGAAGVQGPVGYPGARGVKGADGLRGLKGSKGEKGEDGFPGAKGEMGAKGDNGDAGAQGMRGEDGPEGPKGQSGPLGEPGPAGIAGEKGKLGVPGLPGYPGRQGQKGGDGFPGAVGVPGEKGKKGPPGPAGAAGQRGPNGARGARGARGPTGKSGDKGTSGHDGPPGSTGDRGPQGPQGRVGEMGPKGPNGPAGKDGLPGHPGQRGEPGFQGKTGPPGPTGVVGPQGNTGETGPMGERGHPGSPGPAGEQGLPGAAGKEGSKGDPGGQGTSGKNGPTGLKGFRGSRGAPGAMGPVGLKGGTGPIGPPGPAGPTGERGPPGLAGAIGQPGRPGTSGGPGPMGEKGEPGDKGLIGPAGQDGEQGPVGLPGAAGPPGPPGEDGDKGETGAPGQKGSKGDKGESGPPGPVGSQGPEGQPGAPGVDGEVGPTGQQGMYGQKGDEGARGFKGSRGPGGLQGMPGPPGEKGESGNSGLLGPPGQFGPRGAQGPSGGQGPPGRPGVRGQPGGVGEKGEDGESGDPGAVGVSGSAGEKGEQGEKGDTGPPGAAGSAGARGASGEDGAKGNGGPIGLPGDMGAPGEPGVNGIDGTAGSKGDAGDPGKPGPPGPFGEPGPPGRPGRRGHLGPPGKEGRPGLKGDKGAPGYEGIIGKPGPVGGQGTSGKPGPQGLPGIPGPAGEQGLNGPPGQSGPPGPMGPAGLAGLKGDPGKKGEKGHGGLIGLIGPPGEFGEKGDRGLPGNQGPQGAKGDEGPVGPAGLTGPPGPPGLSGSMGQKGSKGNQGPIGARGDPGPAGPPGPPGSAAVGMAAPPALGKRRRHVEVSVDGAALEEAGSQVEQQMEEVQTEEVQMEEVFASLASMRTDVEGLRTPLGSFHSPARTCRELRLCHPEYPDGVYWIDPNQGCHRDAFKVFCNFTADGETCLQPHSSVQTVKMASWSKEKPGTWFSTFKKGSQFSYVDVDGNPVHVVQLGFLKLLSATARQSFTYVCQNSAGWLDGSTRSYTHALRFRGSNGDELTQRNTHYIQPTHDGCQWRSGQERTVLQLDAPLPDVLPLLDVSVSDFGSLKQKFGFSVGQVCFSG

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
A0A8M6Z682A0A8M6Z682_DANREcol5a3b1724

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias314-338Basic and acidic residues
Compositional bias488-504Basic and acidic residues
Compositional bias679-693Basic and acidic residues
Compositional bias1249-1269Pro residues
Compositional bias1433-1447Pro residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
GQ485669
EMBL· GenBank· DDBJ
ADG36305.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

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