D5BME7 · D5BME7_PUNMI

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular FunctionDNA binding
Molecular Functionhistidine-tRNA ligase activity
Biological ProcessDNA integration
Biological ProcessDNA recombination

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Site-specific recombinase, phage integrase family
      (EC:6.1.1.21
      )

Gene names

    • Ordered locus names
      SAR116_1747

Organism names

  • Taxonomic identifier
  • Strain
    • IMCC1322
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Alphaproteobacteria > Candidatus Puniceispirillales > Candidatus Puniceispirillaceae > Candidatus Puniceispirillum

Accessions

  • Primary accession
    D5BME7

Proteomes

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain112-191Core-binding (CB)
Domain213-395Tyr recombinase

Sequence similarities

Belongs to the 'phage' integrase family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    420
  • Mass (Da)
    48,298
  • Last updated
    2010-06-15 v1
  • Checksum
    4F39403C00FAF4D5
MLKRNQVPKQTHINREPLDAGIIQAVTPRKRQIKRSACDNPGFYIHEPFMEAGCSNKYRVFSVAFRHKGRRFSKTIGHDGDMTVAEARAIAAQIIGDVKTGRCHKPITPKERRFEVFAETFFKRYGHNWKPVTLAGSRRAYEAYIVPFFTGMDVQTVTPENVRRWFAALHDRPGAANRSLALLSVMMREAERYGYRDANTNPCKGMRRYRLRKQERFLSDDEYRHLGRMLAAQESVTPLRVAMIRLLLLTGCRKSEIRTLKWCYYRNGRNGRKHLFLPDSKTGQKMIYLSDPARAILDKIPRKSAWVFPTTIKRKRGRPRKDAVPFFDIDFWNIFRTRAGLDDVRLHDLRHSYASLAIRNGVSLVTLGRLVGHVDPETTLQYTHLTDGALGDAVEIIAQSFLDEDVVEPDKALFDKAGTS

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP001751
EMBL· GenBank· DDBJ
ADE39990.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp