D4GWE9 · D4GWE9_HALVD

Function

Catalytic activity

Pathway

Porphyrin-containing compound metabolism.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular Functionlyase activity

Keywords

  • Molecular function
    • #Lyase

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    siroheme decarboxylase
  • EC number

Gene names

    • Name
      ahbB
    • Synonyms
      nirGH
    • Ordered locus names
      HVO_2313

Organism names

Accessions

  • Primary accession
    D4GWE9
  • Secondary accessions
    • L9V7Y4

Proteomes

PTM/Processing

Proteomic databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain12-62Siroheme decarboxylase NirL-like HTH
Domain76-152Siroheme decarboxylase AsnC-like ligand binding
Domain190-236Siroheme decarboxylase NirL-like HTH
Domain247-338Siroheme decarboxylase AsnC-like ligand binding

Sequence similarities

Belongs to the Ahb/Nir family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    353
  • Mass (Da)
    39,621
  • Last updated
    2010-05-18 v1
  • MD5 Checksum
    F1F6839586D024F1F045A5B048D89028
MIQADADLSRLDRAIVNAFQGGFPVVERPFEPAAAALRERGVDVSAADLCERVRTLDEEGVLSRFGALVNAEEIGGTATLVAMHAPPERFDEVAEQVNDHREVAHNYEREHPHLNMWFVVSVADESRVEEVLGDIEDETGQATYNMPKRHEFHVGAKFLLDGPISDGDLDLSHLGPDVEPTDARTLTPDERDLVMEIQGGLPITETPYADVAEAIGQEPAWVVETVKRFNLEGKVRRVGVIPNHYALGYSENGMTVWNVPDDLVAEVGPEIASLDFVTHCYRRPRHEGVWPYNFFAMTHGRSEEESEARIEQVREVMSDYWDVGDDDWDTLFSTRILKKTGIRLDERAEANTE

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP001956
EMBL· GenBank· DDBJ
ADE03196.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Notice.
Help