D4ACI9 · D4ACI9_RAT

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentacrosomal membrane
Cellular Componentaxonemal basal plate
Cellular Componentaxoneme
Cellular Componentcentriole
Cellular Componentcentrosome
Cellular Componentciliary basal body
Cellular Componentciliary base
Cellular Componentciliary tip
Cellular Componentcilium
Cellular Componentcytoplasm
Cellular Componentintraciliary transport particle B
Cellular Componentkinocilium
Cellular Componentmanchette
Cellular Componentmotile cilium
Cellular Componentnon-motile cilium
Cellular Componentouter acrosomal membrane
Cellular Componentphotoreceptor connecting cilium
Cellular Componentsperm flagellum
Cellular Componentsperm head-tail coupling apparatus
Cellular Componenttrans-Golgi network
Molecular Functionkinesin binding
Biological Processanimal organ morphogenesis
Biological Processanterior/posterior pattern specification
Biological Processbrain development
Biological Processcardiac muscle cell differentiation
Biological Processcardiac septum morphogenesis
Biological Processcilium assembly
Biological Processcilium movement
Biological Processcochlea development
Biological Processcytoplasmic microtubule organization
Biological Processdetermination of left/right symmetry
Biological Processdorsal/ventral pattern formation
Biological Processembryonic digit morphogenesis
Biological Processendothelial cell morphogenesis
Biological Processepidermal stem cell homeostasis
Biological Processepidermis development
Biological Processeye development
Biological Processforebrain development
Biological Processforebrain morphogenesis
Biological Processheart development
Biological Processheart formation
Biological Processinner ear receptor cell stereocilium organization
Biological Processintraciliary transport
Biological Processkeratinocyte proliferation
Biological Processkidney development
Biological Processlimb development
Biological Processliver development
Biological Processlung development
Biological Processlung vasculature development
Biological Processnegative regulation of epithelial cell proliferation
Biological Processnegative regulation of keratinocyte proliferation
Biological Processnervous system development
Biological Processneural precursor cell proliferation
Biological Processnon-motile cilium assembly
Biological ProcessNotch signaling pathway
Biological Processpancreas development
Biological Processpositive regulation of cilium assembly
Biological Processpositive regulation of insulin-like growth factor receptor signaling pathway
Biological Processprimary palate development
Biological Processprotein localization
Biological Processregulation of autophagosome assembly
Biological Processregulation of cilium assembly
Biological Processregulation of fat cell differentiation
Biological Processregulation of feeding behavior
Biological Processregulation of odontogenesis of dentin-containing tooth
Biological Processregulation of protein processing
Biological Processresponse to fluid shear stress
Biological Processresponse to silicon dioxide
Biological Processsmoothened signaling pathway
Biological Processsperm axoneme assembly
Biological Processspermatid nucleus elongation
Biological Processspinal cord dorsal/ventral patterning
Biological Processtelencephalon development

Names & Taxonomy

Protein names

  • Submitted names
    • Intraflagellar transport 88

Gene names

    • Name
      Ift88

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • Brown Norway
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Rattus

Accessions

  • Primary accession
    D4ACI9

Proteomes

Organism-specific databases

Expression

Gene expression databases

Structure

3D structure databases

Family & Domains

Features

Showing features for region, compositional bias.

Type
IDPosition(s)Description
Region112-135Disordered
Compositional bias724-739Basic and acidic residues
Region724-788Disordered

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    788
  • Mass (Da)
    89,176
  • Last updated
    2022-05-25 v2
  • Checksum
    E85317D18DF54434
MMENVHLAPETDEDDLYSGFNDYNPAYDTEELENDTGFQQAVRTSHGRRPPVTAKIPSTAVSRPIATGYGSKTSLTSSMGRPMTGTIQDGVARPMTAVRAAGFSKAALRGSAFDPLGQSRGPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTSPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMSMAPSLKAGFNLILSCFAIGDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLLIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDLEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVSSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDSFLKLHAILRNSAQVLCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKMKEMREQRIKSGRDSGGGSRSKREGSAGSDASYVDPLGPQIERPKTAARKRIDEDDFADEELGDDLLPE

Computationally mapped potential isoform sequences

There are 4 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A8I5ZPQ6A0A8I5ZPQ6_RATIft88825
A0A096MJ06A0A096MJ06_RATIft88775
A0A096MK92A0A096MK92_RATIft88110
A0A096MJE9A0A096MJE9_RATIft88164

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias724-739Basic and acidic residues

Keywords

Sequence databases

Genome annotation databases

Similar Proteins

Disclaimer

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