D3YV10 · CCD13_MOUSE

  • Protein
    Coiled-coil domain-containing protein 13
  • Gene
    Ccdc13
  • Status
    UniProtKB reviewed (Swiss-Prot)
  • Amino acids
  • Protein existence
    Evidence at protein level
  • Annotation score
    3/5

Function

function

Required for primary cilia formation and promotes the localization of the ciliopathy protein BBS4 to both centriolar satellites and cilia.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcell projection
Cellular Componentcentriolar satellite
Cellular Componentcytosol
Cellular Componentnucleoplasm
Biological Processcytoplasmic microtubule organization
Biological ProcessDNA damage response
Biological Processnon-motile cilium assembly

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Coiled-coil domain-containing protein 13

Gene names

    • Name
      Ccdc13

Organism names

  • Taxonomic identifier
  • Strain
    • C57BL/6J
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus

Accessions

  • Primary accession
    D3YV10

Proteomes

Organism-specific databases

PTM/Processing

Features

Showing features for chain, modified residue.

Type
IDPosition(s)Description
ChainPRO_00004319581-709Coiled-coil domain-containing protein 13
Modified residue258Phosphoserine
Modified residue469Phosphoserine
Modified residue532Phosphoserine

Keywords

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Subunit

Interacts with PCM1, CEP290 and PCNT.

Protein-protein interaction databases

Miscellaneous

Structure

Family & Domains

Features

Showing features for coiled coil, region, compositional bias.

Type
IDPosition(s)Description
Coiled coil70-97
Coiled coil139-178
Coiled coil206-288
Region281-312Disordered
Compositional bias286-308Polar residues
Coiled coil323-457
Region462-499Disordered
Compositional bias512-537Polar residues
Region512-542Disordered
Coiled coil539-604
Region600-641Disordered
Compositional bias607-641Polar residues

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    709
  • Mass (Da)
    79,750
  • Last updated
    2010-04-20 v1
  • MD5 Checksum
    90E337B3103E77B4AD2F80545E88A142
MAADESSADTLRLQFKAMQELQHRRLQKQMEKKREKELSCQSKADNQEGFMVIPDGLSLLDTEEQNLKNIFEKRVLEDEIQHLRSELRETVDENGRLYKLLKERDFEIKHLKKKIEEDRFAFTGASGMAGDLVATKIVELSKKNRGLMAESESAKVRIKQLTNRIQELEHQLQMASAKPPSKGATDAGAKPLKTQTGDRALLETPEVKALQDRLAATNLKMSDLRNQIQSAKQELRVAQKVLANEVGEDVNIQQLLASPGTWRGRAQQILVLQSRVRDLEKQLGQRQNKPAGSSSSEVPLSSDSRKMTAQEKNLLRIRSLERDKQESWEKLASERDTLQTELEELRKKFEGMRSRNKVLSSEVKTLRSQMTTLVEKGRHDDELIDALMDQLKQLQDILSSLSVQEESRRTSQQHLDQKVNSEAQRSSSLVAQLRAMVADREAKVRQLELEIGQLSVQYLHGKGGGEGASPADARFPEDQTPITNSPASAGDHVGRLGSSRSVTSLGHTLVESALTRPSLPSPHGTSPRFSDSPEQKGWQAQAAEMKALWQAAEVERDRLNEFVTVLQKRVEESSSKLLEAERRLQEERQRAVLLEQHLEKMRLEPSRASVSQKTKNKPGPPAANTKPNSAGSAKKDSSSTQLCDMPMESQIQELNARLAIQMEENGILRDALGSALRGKEEDFRMYHQTLGQVKGVFLQALRQQKANKQ

Computationally mapped potential isoform sequences

There are 2 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
Q8BYN7Q8BYN7_MOUSECcdc13254
F6RL14F6RL14_MOUSECcdc13101

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias286-308Polar residues
Compositional bias512-537Polar residues
Compositional bias607-641Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AC165080
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

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