D3VLN7 · D3VLN7_XENNA
- ProteinNucleoside diphosphate kinase
- Genendk
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids142 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
function
Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
Catalytic activity
- a 2'-deoxyribonucleoside 5'-diphosphate + ATP = a 2'-deoxyribonucleoside 5'-triphosphate + ADP
Cofactor
Features
Showing features for binding site, active site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Binding site | 11 | ATP (UniProtKB | ChEBI) | |||
Binding site | 59 | ATP (UniProtKB | ChEBI) | |||
Binding site | 87 | ATP (UniProtKB | ChEBI) | |||
Binding site | 93 | ATP (UniProtKB | ChEBI) | |||
Binding site | 104 | ATP (UniProtKB | ChEBI) | |||
Binding site | 114 | ATP (UniProtKB | ChEBI) | |||
Active site | 117 | Pros-phosphohistidine intermediate | |||
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Molecular Function | ATP binding | |
Molecular Function | metal ion binding | |
Molecular Function | nucleoside diphosphate kinase activity | |
Biological Process | CTP biosynthetic process | |
Biological Process | GTP biosynthetic process | |
Biological Process | phosphorylation | |
Biological Process | UTP biosynthetic process |
Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameNucleoside diphosphate kinase
- EC number
- Short namesNDK ; NDP kinase
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageBacteria > Pseudomonadota > Gammaproteobacteria > Enterobacterales > Morganellaceae > Xenorhabdus
Accessions
- Primary accessionD3VLN7
Proteomes
Subcellular Location
PTM/Processing
Keywords
- PTM
Interaction
Structure
Family & Domains
Sequence
- Sequence statusComplete
- Length142
- Mass (Da)15,890
- Last updated2010-04-20 v1
- ChecksumD4CE9BD3B655ADEC
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
FN667742 EMBL· GenBank· DDBJ | CBJ91363.1 EMBL· GenBank· DDBJ | Genomic DNA |