D3KVM2 · D3KVM2_DANRE

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentaxon cytoplasm
Cellular Componentcytoplasmic microtubule
Cellular Componentmembrane
Biological Processaxonal transport of mitochondrion
Biological Processdetermination of dorsal identity
Biological Processregulation of canonical Wnt signaling pathway
Biological Processregulation of Wnt signaling pathway
Biological Processsynapse maturation

Names & Taxonomy

Protein names

  • Submitted names
    • Syntabulin
    • Syntabulin isoform X2

Gene names

    • Name
      sybu
    • Synonyms
      fi06c06
      , syn
      , wu:fi06c06
      , zgc:153017

Organism names

  • Taxonomic identifier
  • Strain
    • Tuebingen
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    D3KVM2
  • Secondary accessions
    • A0A8M2B4K3
    • E7EXJ7
    • F1RD86

Proteomes

Organism-specific databases

Subcellular Location

Membrane
; Single-pass membrane protein

Keywords

  • Cellular component

PTM/Processing

Keywords

Expression

Gene expression databases

Family & Domains

Features

Showing features for region, compositional bias, coiled coil.

TypeIDPosition(s)Description
Region1-120Disordered
Compositional bias11-47Polar residues
Compositional bias78-100Polar residues
Coiled coil174-201
Region373-398Disordered

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    506
  • Mass (Da)
    55,641
  • Last updated
    2010-04-20 v1
  • Checksum
    A26536B133A7C248
MVLSKGKRCFSGSETDFSSSSSAGSYKTRETQLSNSAGKNLSSRSRGPHIRSLPVFKPAGSPSAPRDAELYAPIRTPPKTPSFTNSSSCSNSSSSRRRTAPVRYHSCGDNHGIKPPNPEQYLTPLQQKEVAIRHLKTKLRDSENTVCDRESEIEELKSQLGRMREDWIEEECHRVEAQLALKEARKEIKQLRQVVETMKNSLMEKDKGIQKYFIDINIQNRKLESLLHSMELAQNGCNLQDEPTLDFICEAPESSTEAKMELELHCGEQAVEEMANSELLINDEMVNRVEILMSTAVDSSQDGSTKIISQPGLSCLEPSVSEKSTKEHVSSIPIGAEDKGIQTDDVIYSTDLQTLLYQLLKLQGGGFPGLLVPSPNQSHDISSAQAPKKSQKEELPEAHEQDVAISTAQIVPSDSGLGFSEPEVGPEFMEEMNSKNKAVVGKNHWSNNFFVDLVAVAAPVLPTVAWLYSQHGLVGGAPVYNIASLIRGCCVMGLHSLRHVSHGPDT

Computationally mapped potential isoform sequences

There are 2 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
Q08CJ9Q08CJ9_DANREsybu628
A0A8M2B4L2A0A8M2B4L2_DANREsybu614

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias11-47Polar residues
Compositional bias78-100Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CR925805
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
AB517947
EMBL· GenBank· DDBJ
BAI77483.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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