D3GE74 · STR1_MEDTR

Function

function

Together with STR2, required for arbuscule development in arbuscular mycorrhizal (AM) symbiosis.

Features

Showing features for binding site.

1817100200300400500600700800
TypeIDPosition(s)Description
Binding site87-94ATP (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmembrane
Cellular Componentperiarbuscular membrane
Cellular Componentplasma membrane
Molecular FunctionABC-type transporter activity
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular FunctionATPase-coupled transmembrane transporter activity
Biological Processarbuscular mycorrhizal association
Biological Processresponse to symbiotic fungus
Biological Processtransmembrane transport

Keywords

Enzyme and pathway databases

Protein family/group databases

Names & Taxonomy

Protein names

  • Recommended name
    ABC transporter G family member STR
  • EC number
  • Alternative names
    • Protein STUNTED ARBUSCULE

Gene names

    • Name
      STR
    • ORF names
      MtrunA17_Chr8g0393191
    • Ordered locus names
      MTR_8g107450

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Jemalong A17
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Fabales > Fabaceae > Papilionoideae > 50 kb inversion clade > NPAAA clade > Hologalegina > IRL clade > Trifolieae > Medicago

Accessions

  • Primary accession
    D3GE74

Proteomes

Genome annotation databases

Subcellular Location

Cell membrane
; Multi-pass membrane protein
Note: Located in the peri-arbuscular membrane of arbuscular mycorrhiza (AM).

Features

Showing features for topological domain, transmembrane.

TypeIDPosition(s)Description
Topological domain1-542Cytoplasmic
Transmembrane543-563Helical; Name=1
Topological domain564-579Extracellular
Transmembrane580-600Helical; Name=2
Topological domain601-621Cytoplasmic
Transmembrane622-642Helical; Name=3
Topological domain643-657Extracellular
Transmembrane658-678Helical; Name=4
Topological domain679-681Cytoplasmic
Transmembrane682-702Helical; Name=5
Topological domain703-787Extracellular
Transmembrane788-808Helical; Name=6
Topological domain809-817Cytoplasmic

Keywords

Phenotypes & Variants

Disruption phenotype

Stunted arbuscule phenotype due to an impaired arbuscule development during arbuscular mycorrhizal (AM) symbiosis with Glomus versiforme; normal initial phases of the symbiosis, including hyphopodia formation and fungal entry into the cortex, as well as normal arbuscule development initiation, including arbuscule-associated genes expression, but strongly delayed and impaired arbuscule development (PubMed:20453115).
Normal nodulation in the presence of Sinorhizobium meliloti (PubMed:20453115).

PTM/Processing

Features

Showing features for chain, glycosylation.

TypeIDPosition(s)Description
ChainPRO_00004500181-817ABC transporter G family member STR
Glycosylation762N-linked (GlcNAc...) asparagine

Keywords

Proteomic databases

PTM databases

Expression

Tissue specificity

Expressed constitutively in the vascular tissue of roots.

Induction

Accumulates in roots cortical cells containing arbuscules, in a RAM1-dependent manner, upon arbuscular mycorrhizal (AM) symbiosis with Glomus versiforme (PubMed:20453115, PubMed:26511916).
Triggered by RAM1 (PubMed:26511916).

Interaction

Subunit

Heterodimerizes with STR2; the resulting transporter is located in the peri-arbuscular membrane.

Structure

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region1-30Disordered
Compositional bias15-30Polar residues
Domain43-294ABC transporter
Region321-349Disordered
Region362-395Disordered
Region439-463Disordered

Sequence similarities

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    817
  • Mass (Da)
    91,885
  • Last updated
    2010-03-23 v1
  • Checksum
    70B5CE92E5EA19D6
MARLERDGTNKSLESLMDSHKPGGTTTNLNQLRTQKSIPGYGLEFTNLSYSIIKKQKKDGVWINKETYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLQGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVHELLNKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDSTSAYSVVEKIKDIAQGGSIVLMTIHQPSFRIQMLLDKITILARGRLIYMGRPDALHTHLSGFGRPVPDGENNIEYLLDVITEYDQATVGLDPLVQYQHDGHKPDPAAMTPVPKPPRTPYRRNTPASKHMISLRSQGFTAGTPQPDSSQFGLDDDDNDDDENFDNSLERRSVQTSRNIVTSGVYPRLASQFYQDFSAKDFSVWLYNGVVGTPRRPPSWTPARTPGWTPGKTPLSGPRSFVSNQHSASYQDPYYIQKTNTVVGQSMDYSATSYAPSYEEFEIEEVLDEPDLGPKYANPWLREVAVLSWRTVLNVIRTPELFASREIVLTVMALVLSTIFKNLGDTTFIDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAVITKLMLHLKSNLFNFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPAYWKWLHYISAIKYPFEGLLINEFKNNRGCYSGNKADLSPGPLGDVKPSKHHNASLPLNCLLGEDVLSTMDITMESLWYDILILLAWGVLYRFFFYLVLRFYSKNERK

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias15-30Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
FJ659114
EMBL· GenBank· DDBJ
ACV73541.1
EMBL· GenBank· DDBJ
Genomic DNA
FJ659115
EMBL· GenBank· DDBJ
ACV73542.1
EMBL· GenBank· DDBJ
mRNA
CM001224
EMBL· GenBank· DDBJ
AET05608.1
EMBL· GenBank· DDBJ
Genomic DNA
PSQE01000008
EMBL· GenBank· DDBJ
RHN43934.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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