D3GE74 · STR1_MEDTR
- ProteinABC transporter G family member STR
- GeneSTR
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids817 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Together with STR2, required for arbuscule development in arbuscular mycorrhizal (AM) symbiosis.
Features
Showing features for binding site.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | membrane | |
Cellular Component | periarbuscular membrane | |
Cellular Component | plasma membrane | |
Molecular Function | ABC-type transporter activity | |
Molecular Function | ATP binding | |
Molecular Function | ATP hydrolysis activity | |
Molecular Function | ATPase-coupled transmembrane transporter activity | |
Biological Process | arbuscular mycorrhizal association | |
Biological Process | response to symbiotic fungus | |
Biological Process | transmembrane transport |
Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Protein family/group databases
Names & Taxonomy
Protein names
- Recommended nameABC transporter G family member STR
- EC number
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Fabales > Fabaceae > Papilionoideae > 50 kb inversion clade > NPAAA clade > Hologalegina > IRL clade > Trifolieae > Medicago
Accessions
- Primary accessionD3GE74
Proteomes
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Cell membrane ; Multi-pass membrane protein
Note: Located in the peri-arbuscular membrane of arbuscular mycorrhiza (AM).
Features
Showing features for topological domain, transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Topological domain | 1-542 | Cytoplasmic | ||||
Sequence: MARLERDGTNKSLESLMDSHKPGGTTTNLNQLRTQKSIPGYGLEFTNLSYSIIKKQKKDGVWINKETYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLQGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVHELLNKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDSTSAYSVVEKIKDIAQGGSIVLMTIHQPSFRIQMLLDKITILARGRLIYMGRPDALHTHLSGFGRPVPDGENNIEYLLDVITEYDQATVGLDPLVQYQHDGHKPDPAAMTPVPKPPRTPYRRNTPASKHMISLRSQGFTAGTPQPDSSQFGLDDDDNDDDENFDNSLERRSVQTSRNIVTSGVYPRLASQFYQDFSAKDFSVWLYNGVVGTPRRPPSWTPARTPGWTPGKTPLSGPRSFVSNQHSASYQDPYYIQKTNTVVGQSMDYSATSYAPSYEEFEIEEVLDEPDLGPKYANPWLREVAVLSWRTVLNVIRTP | ||||||
Transmembrane | 543-563 | Helical; Name=1 | ||||
Sequence: ELFASREIVLTVMALVLSTIF | ||||||
Topological domain | 564-579 | Extracellular | ||||
Sequence: KNLGDTTFIDINRLLN | ||||||
Transmembrane | 580-600 | Helical; Name=2 | ||||
Sequence: FYIFAVCLVFFSSNDAVPSFI | ||||||
Topological domain | 601-621 | Cytoplasmic | ||||
Sequence: MERFIFIRETSHNAYRASSYV | ||||||
Transmembrane | 622-642 | Helical; Name=3 | ||||
Sequence: ISSLIVYLPFFAVQGLTFAVI | ||||||
Topological domain | 643-657 | Extracellular | ||||
Sequence: TKLMLHLKSNLFNFW | ||||||
Transmembrane | 658-678 | Helical; Name=4 | ||||
Sequence: MILFASLITTNAYVMLVSALV | ||||||
Topological domain | 679-681 | Cytoplasmic | ||||
Sequence: PSY | ||||||
Transmembrane | 682-702 | Helical; Name=5 | ||||
Sequence: ITGYAVVIATTALFFLTCGFF | ||||||
Topological domain | 703-787 | Extracellular | ||||
Sequence: LKRTQIPAYWKWLHYISAIKYPFEGLLINEFKNNRGCYSGNKADLSPGPLGDVKPSKHHNASLPLNCLLGEDVLSTMDITMESLW | ||||||
Transmembrane | 788-808 | Helical; Name=6 | ||||
Sequence: YDILILLAWGVLYRFFFYLVL | ||||||
Topological domain | 809-817 | Cytoplasmic | ||||
Sequence: RFYSKNERK |
Keywords
- Cellular component
Phenotypes & Variants
Disruption phenotype
Stunted arbuscule phenotype due to an impaired arbuscule development during arbuscular mycorrhizal (AM) symbiosis with Glomus versiforme; normal initial phases of the symbiosis, including hyphopodia formation and fungal entry into the cortex, as well as normal arbuscule development initiation, including arbuscule-associated genes expression, but strongly delayed and impaired arbuscule development (PubMed:20453115).
Normal nodulation in the presence of Sinorhizobium meliloti (PubMed:20453115).
Normal nodulation in the presence of Sinorhizobium meliloti (PubMed:20453115).
PTM/Processing
Features
Showing features for chain, glycosylation.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000450018 | 1-817 | ABC transporter G family member STR | |||
Sequence: MARLERDGTNKSLESLMDSHKPGGTTTNLNQLRTQKSIPGYGLEFTNLSYSIIKKQKKDGVWINKETYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLQGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVHELLNKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDSTSAYSVVEKIKDIAQGGSIVLMTIHQPSFRIQMLLDKITILARGRLIYMGRPDALHTHLSGFGRPVPDGENNIEYLLDVITEYDQATVGLDPLVQYQHDGHKPDPAAMTPVPKPPRTPYRRNTPASKHMISLRSQGFTAGTPQPDSSQFGLDDDDNDDDENFDNSLERRSVQTSRNIVTSGVYPRLASQFYQDFSAKDFSVWLYNGVVGTPRRPPSWTPARTPGWTPGKTPLSGPRSFVSNQHSASYQDPYYIQKTNTVVGQSMDYSATSYAPSYEEFEIEEVLDEPDLGPKYANPWLREVAVLSWRTVLNVIRTPELFASREIVLTVMALVLSTIFKNLGDTTFIDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAVITKLMLHLKSNLFNFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPAYWKWLHYISAIKYPFEGLLINEFKNNRGCYSGNKADLSPGPLGDVKPSKHHNASLPLNCLLGEDVLSTMDITMESLWYDILILLAWGVLYRFFFYLVLRFYSKNERK | ||||||
Glycosylation | 762 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Tissue specificity
Expressed constitutively in the vascular tissue of roots.
Induction
Interaction
Subunit
Heterodimerizes with STR2; the resulting transporter is located in the peri-arbuscular membrane.
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-30 | Disordered | ||||
Sequence: MARLERDGTNKSLESLMDSHKPGGTTTNLN | ||||||
Compositional bias | 15-30 | Polar residues | ||||
Sequence: SLMDSHKPGGTTTNLN | ||||||
Domain | 43-294 | ABC transporter | ||||
Sequence: LEFTNLSYSIIKKQKKDGVWINKETYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLQGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVHELLNKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDSTSAYSVVEKIKDIAQGGSIVLMTIHQPSFRIQMLLDKITILARGRLIYMGRPDALHTHLSGFGRPVPD | ||||||
Region | 321-349 | Disordered | ||||
Sequence: QYQHDGHKPDPAAMTPVPKPPRTPYRRNT | ||||||
Region | 362-395 | Disordered | ||||
Sequence: GFTAGTPQPDSSQFGLDDDDNDDDENFDNSLERR | ||||||
Region | 439-463 | Disordered | ||||
Sequence: RPPSWTPARTPGWTPGKTPLSGPRS |
Sequence similarities
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length817
- Mass (Da)91,885
- Last updated2010-03-23 v1
- Checksum70B5CE92E5EA19D6
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 15-30 | Polar residues | ||||
Sequence: SLMDSHKPGGTTTNLN |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
FJ659114 EMBL· GenBank· DDBJ | ACV73541.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
FJ659115 EMBL· GenBank· DDBJ | ACV73542.1 EMBL· GenBank· DDBJ | mRNA | ||
CM001224 EMBL· GenBank· DDBJ | AET05608.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
PSQE01000008 EMBL· GenBank· DDBJ | RHN43934.1 EMBL· GenBank· DDBJ | Genomic DNA |