D2A605 · D2A605_TRICA
- ProteinTranscription elongation factor SPT5
- GeneAUGUSTUS-3.0.2_15626
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1061 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | DSIF complex | |
Molecular Function | mRNA binding | |
Molecular Function | translation elongation factor activity | |
Biological Process | regulation of DNA-templated transcription elongation | |
Biological Process | regulation of transcription by RNA polymerase II | |
Biological Process | transcription elongation by RNA polymerase II | |
Biological Process | transcription elongation-coupled chromatin remodeling |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended nameTranscription elongation factor SPT5
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Metazoa > Ecdysozoa > Arthropoda > Hexapoda > Insecta > Pterygota > Neoptera > Endopterygota > Coleoptera > Polyphaga > Cucujiformia > Tenebrionidae > Tenebrionidae incertae sedis > Tribolium
Accessions
- Primary accessionD2A605
Proteomes
Subcellular Location
PTM/Processing
Keywords
- PTM
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 1-26 | Polar residues | |||
Region | 1-124 | Disordered | |||
Compositional bias | 27-45 | Basic residues | |||
Compositional bias | 60-84 | Acidic residues | |||
Compositional bias | 107-124 | Acidic residues | |||
Domain | 202-293 | NusG-like N-terminal | |||
Domain | 298-325 | KOW | |||
Region | 348-377 | Disordered | |||
Compositional bias | 350-369 | Basic and acidic residues | |||
Domain | 448-475 | KOW | |||
Domain | 500-527 | KOW | |||
Domain | 622-649 | KOW | |||
Region | 692-737 | Disordered | |||
Domain | 737-764 | KOW | |||
Region | 785-820 | Disordered | |||
Compositional bias | 791-820 | Polar residues | |||
Domain | 799-910 | Spt5 C-terminal | |||
Region | 899-936 | Disordered | |||
Domain | 1009-1036 | KOW | |||
Sequence similarities
Belongs to the SPT5 family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,061
- Mass (Da)117,339
- Last updated2010-02-09 v1
- ChecksumC3D7E2FFD3355393
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 1-26 | Polar residues | |||
Compositional bias | 27-45 | Basic residues | |||
Compositional bias | 60-84 | Acidic residues | |||
Compositional bias | 107-124 | Acidic residues | |||
Compositional bias | 350-369 | Basic and acidic residues | |||
Compositional bias | 791-820 | Polar residues | |||
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
KQ971345 EMBL· GenBank· DDBJ | EFA05446.1 EMBL· GenBank· DDBJ | Genomic DNA |