D2A605 · D2A605_TRICA

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentDSIF complex
Molecular FunctionmRNA binding
Molecular Functiontranslation elongation factor activity
Biological Processregulation of DNA-templated transcription elongation
Biological Processregulation of transcription by RNA polymerase II
Biological Processtranscription elongation by RNA polymerase II
Biological Processtranscription elongation-coupled chromatin remodeling

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Transcription elongation factor SPT5

Gene names

    • Name
      AUGUSTUS-3.0.2_15626
    • ORF names
      TcasGA2_TC015626

Organism names

  • Taxonomic identifier
  • Strain
    • Georgia GA2
  • Taxonomic lineage
    Eukaryota > Metazoa > Ecdysozoa > Arthropoda > Hexapoda > Insecta > Pterygota > Neoptera > Endopterygota > Coleoptera > Polyphaga > Cucujiformia > Tenebrionidae > Tenebrionidae incertae sedis > Tribolium

Accessions

  • Primary accession
    D2A605

Proteomes

Subcellular Location

Keywords

  • Cellular component

PTM/Processing

Keywords

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for compositional bias, region, domain.

Type
IDPosition(s)Description
Compositional bias1-26Polar residues
Region1-124Disordered
Compositional bias27-45Basic residues
Compositional bias60-84Acidic residues
Compositional bias107-124Acidic residues
Domain202-293NusG-like N-terminal
Domain298-325KOW
Region348-377Disordered
Compositional bias350-369Basic and acidic residues
Domain448-475KOW
Domain500-527KOW
Domain622-649KOW
Region692-737Disordered
Domain737-764KOW
Region785-820Disordered
Compositional bias791-820Polar residues
Domain799-910Spt5 C-terminal
Region899-936Disordered
Domain1009-1036KOW

Sequence similarities

Belongs to the SPT5 family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,061
  • Mass (Da)
    117,339
  • Last updated
    2010-02-09 v1
  • Checksum
    C3D7E2FFD3355393
MSDSEGSNFSDNASEAGSVRSRSSRGSRSRSPSRSRSRSRSRSKSGSRSARSGSEAREASEPEEVEEEQEPEGDSLDEYDSEEDESDSGRAKKKKKKDRYGGFIIDEAEVDDEVEDEDEWEEGAQEIGIVPNEVDEFGPTAREIEGRRRGTNLWDAQKEHEIEEYLRKKYADDSAAAKHFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEEKATALLLMRKYLAYQNTSEPLQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKEQTGLKSKQWVRLKRGLYKDDIAQVDYFDMAQNQVHLKLLPRIDYTRLRGALRTTQSESEAEKRKKKRRPPSKPFDPEAIRSIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTLSAVIIDGVKPTLAELERFEEQPEGIDLELPTEKEDKAVTHSFSAGDNVEVCEGELINLQGKIISIDGTMITIMPKHEDLKEPLFFHASELKKYFKMGDHVKVLAGRYEGDTGLVVRVENNRVVLISDLTMHEMEILPKDLQLCTDMASGVDSLGKFEWGDLVNLDAETVGVIVRLERENFHVLNMHGKVVECRPGSLQKRRLNRFTAALDSYRNNLHRKDMVKVIDGPHSGFSGEIKHLYRNFAFLHSVEFLQNGGIFVCKTKHLQLAGGNKSVPSADISTGMEYMSPRRSSPMHPSSGGGGMGGFASPRPGGGGGGGGGGGRGRVSRDRDIIGTTIKITKGPYKGNIGIVKDATQSTARIELHTSCQTISVDRSHIADVGTPSRDGSISSYGRTPAYTGNQTPLYRDTGNKTPMCDSGSRTPLHYGGSMTPIHDGSRTPNASSEWDPTVSNTYPSPGYNPGTPGYQMNGPFTPQTPGTIYDSTYSPYQASPGYQSAISTPSPATGYGQSPASNNPYNTPSSGYSPNMPYNPQTPGAGLDVLPMTDWHTIDIEVRIRDSHDDPGLVGQTGIIRSISGAMCSIFLPEEDRVVNIISDHLEPVRPQRGDAFKVIIGEEREATGELLSIDLHEGVVKMKNDIKMLPLQNLCKMRKDL

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-26Polar residues
Compositional bias27-45Basic residues
Compositional bias60-84Acidic residues
Compositional bias107-124Acidic residues
Compositional bias350-369Basic and acidic residues
Compositional bias791-820Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
KQ971345
EMBL· GenBank· DDBJ
EFA05446.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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