The map-based sequence of the rice genome.International rice genome sequencing project (IRGSP)View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]Straincv. NipponbareCategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCNature 436:793-800 (2005)Cited in99+99+
The rice annotation project database (RAP-DB): 2008 update.The rice annotation project (RAP)View abstractCited forGENOME REANNOTATIONStraincv. NipponbareCategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCNucleic Acids Res. 36:D1028-D1033 (2008)Cited in99+99+
Structure, organization and chromosomal location of the gene encoding a form of rice soluble starch synthase.Tanaka K., Ohnishi S., Kishimoto N., Kawasaki T., Baba T.View abstractCategoriesSequencesSourceIC4R: Os06g0160700PubMedEurope PMCPlant Physiol. 108:677-683 (1995)Cited in1Mapped to3
Underlying Mechanisms of Zymographic Diversity in Starch Synthase I and Pullulanase in Rice-Developing Endosperm.Chen Y., Bao J.View abstractCategoriesSequencesSourceIC4R: Os06g0160700PubMedEurope PMCJ Agric Food Chem 64:2030-2037 (2016)Mapped to11
Alanine aminotransferase 1 (OsAlaAT1) plays an essential role in the regulation of starch storage in rice endosperm.Yang J., Kim S.R., Lee S.K., Choi H., Jeon J.S., An G.View abstractCategoriesFunction, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCPlant Sci 240:79-89 (2015)Mapped to5
Amylopectin biosynthetic enzymes from developing rice seed form enzymatically active protein complexes.Crofts N., Abe N., Oitome N.F., Matsushima R., Hayashi M., Tetlow I.J., Emes M.J., Nakamura Y., Fujita N.View abstractCategoriesInteractionSourceIC4R: Os06g0160700PubMedEurope PMCJ Exp Bot 66:4469-4482 (2015)Mapped to12
The different effects of starch synthase IIa mutations or variation on endosperm amylose content of barley, wheat and rice are determined by the distribution of starch synthase I and starch branching enzyme IIb between the starch granule and amyloplast stroma.Luo J., Ahmed R., Kosar-Hashemi B., Larroque O., Butardo V.M. Jr., Tanner G.J., Colgrave M.L., Upadhyaya N.M., Tetlow I.J.[...], Li Z.View abstractCategoriesFunction, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCTheor Appl Genet 128:1407-1419 (2015)Mapped to4
Allelic effects on starch structure and properties of six starch biosynthetic genes in a rice recombinant inbred line population.Luo J., Jobling S.A., Millar A., Morell M.K., Li Z.View abstractCategoriesFunction, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCRice (N Y) 8:15-15 (2015)Mapped to2
In vitro studies of enzymatic properties of starch synthases and interactions between starch synthase I and starch branching enzymes from rice.Nakamura Y., Aihara S., Crofts N., Sawada T., Fujita N.View abstractCategoriesFunctionSourceIC4R: Os06g0160700PubMedEurope PMCPlant Sci 224:1-8 (2014)Mapped to9
Relationships between starch synthase I and branching enzyme isozymes determined using double mutant rice lines.Abe N., Asai H., Yago H., Oitome N.F., Itoh R., Crofts N., Nakamura Y., Fujita N.View abstractCategoriesFunction, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCBMC Plant Biol 14:80-80 (2014)Mapped to9
Suppression of starch synthase I expression affects the granule morphology and granule size and fine structure of starch in wheat endosperm.McMaugh S.J., Thistleton J.L., Anschaw E., Luo J., Konik-Rose C., Wang H., Huang M., Larroque O., Regina A.[...], Li Z.View abstractCategoriesFunction, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCJ Exp Bot 65:2189-2201 (2014)Mapped to16
Application of stress indices for low temperature and deep sowing stress screening of rice genotypes.Bevilacqua C.B., Monzon D.R., Venske E., Basu S., Zimmer P.D.View abstractCategoriesFunction, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCPak J Biol Sci 16:1618-1622 (2013)Mapped to2
Association mapping of starch physicochemical properties with starch biosynthesizing genes in waxy rice (Oryza sativa L.).Xu F., Zhang G., Tong C., Sun X., Corke H., Sun M., Bao J.View abstractCategoriesFunctionSourceIC4R: Os06g0160700PubMedEurope PMCJ Agric Food Chem 61:10110-10117 (2013)Mapped to6
SALT-RESPONSIVE ERF1 is a negative regulator of grain filling and gibberellin-mediated seedling establishment in rice.Schmidt R., Schippers J.H., Mieulet D., Watanabe M., Hoefgen R., Guiderdoni E., Mueller-Roeber B.View abstractCategoriesExpressionSourceIC4R: Os06g0160700PubMedEurope PMCMol Plant 7:404-421 (2014)Mapped to8
Biomolecular analyses of starch and starch granule proteins in the high- amylose rice mutant Goami 2.Butardo V.M. Jr., Daygon V.D., Colgrave M.L., Campbell P.M., Resurreccion A., Cuevas R.P., Jobling S.A., Tetlow I., Rahman S.[...], Fitzgerald M.View abstractCategoriesSequences, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCJ Agric Food Chem 60:11576-11585 (2012)Mapped to2
SNP in starch biosynthesis genes associated with nutritional and functional properties of rice.Kharabian-Masouleh A., Waters D.L., Reinke R.F., Ward R., Henry R.J.View abstractCategoriesFunctionSourceIC4R: Os06g0160700PubMedEurope PMCSci Rep 2:557-557 (2012)Mapped to11
Lack of starch synthase IIIa and high expression of granule-bound starch synthase I synergistically increase the apparent amylose content in rice endosperm.Crofts N., Abe K., Aihara S., Itoh R., Nakamura Y., Itoh K., Fujita N.View abstractCategoriesFunction, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCPlant Sci 193-194:62-69 (2012)Mapped to4
Marker-free site-specific gene integration in rice based on the use of two recombination systems.Nandy S., Srivastava V.View abstractCategoriesFunction, Sequences, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCPlant Biotechnol J 10:904-912 (2012)Mapped to2
Starch biosynthesis in rice endosperm requires the presence of either starch synthase I or IIIa.Fujita N., Satoh R., Hayashi A., Kodama M., Itoh R., Aihara S., Nakamura Y.View abstractCategoriesPhenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCJ. Exp. Bot. 62:4819-4831 (2011)Cited in2Mapped to40
Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch.Zhang G., Cheng Z., Zhang X., Guo X., Su N., Jiang L., Mao L., Wan J.View abstractCategoriesFunctionSourceIC4R: Os06g0160700PubMedEurope PMCGenome 54:448-459 (2011)Cited in1Mapped to2
Molecular aspect of good eating quality formation in Japonica rice.Sun M.M., Abdula S.E., Lee H.J., Cho Y.C., Han L.Z., Koh H.J., Cho Y.G.View abstractCategoriesFunction, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCPLoS One 6:e18385-e18385 (2011)Cited in5Mapped to11
Structures of starches from rice mutants deficient in the starch synthase isozyme SSI or SSIIIa.Hanashiro I., Higuchi T., Aihara S., Nakamura Y., Fujita N.View abstractCategoriesFunction, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCBiomacromolecules 12:1621-1628 (2011)Cited in2Mapped to1
Site-specific gene integration in rice genome mediated by the FLP-FRT recombination system.Nandy S., Srivastava V.View abstractCategoriesFunction, Phenotypes & VariantsSourceIC4R: Os06g0160700PubMedEurope PMCPlant Biotechnol J 9:713-721 (2011)Mapped to2
Combining QTL mapping and transcriptome profiling of bulked RILs for identification of functional polymorphism for salt tolerance genes in rice (Oryza sativa L.).Pandit A., Rai V., Bal S., Sinha S., Kumar V., Chauhan M., Gautam R.K., Singh R., Sharma P.C.[...], Singh N.K.View abstractCategoriesSequencesSourceIC4R: Os06g0160700PubMedEurope PMCMol Genet Genomics 284:121-136 (2010)Mapped to4
Cloning, characterisation and comparative analysis of a starch synthase IV gene in wheat: functional and evolutionary implications.Leterrier M., Holappa L.D., Broglie K.E., Beckles D.M.View abstractCategoriesSequencesSourceIC4R: Os06g0160700PubMedEurope PMCBMC Plant Biol 8:98-98 (2008)Mapped to3