C7FZU3 · C7FZU3_CAEEL
- ProteinNidogen
- Genenid-1
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids1527 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | basal part of cell | |
Cellular Component | basement membrane | |
Cellular Component | membrane | |
Cellular Component | synapse | |
Molecular Function | calcium ion binding | |
Molecular Function | extracellular matrix structural constituent | |
Biological Process | cell-matrix adhesion | |
Biological Process | neuron migration | |
Biological Process | protein localization to synapse | |
Biological Process | synapse organization | |
Biological Process | synaptic transmission, cholinergic |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Metazoa > Ecdysozoa > Nematoda > Chromadorea > Rhabditida > Rhabditina > Rhabditomorpha > Rhabditoidea > Rhabditidae > Peloderinae > Caenorhabditis
Accessions
- Primary accessionC7FZU3
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Keywords
- Cellular component
PTM/Processing
Features
Showing features for signal, chain, disulfide bond.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-21 | |||||
Sequence: MKHKKMLILLFLYLLIETTTA | ||||||
Chain | PRO_5002977734 | 22-1527 | ||||
Sequence: NPAFYPYGQPAGDNRLDYSMEQSAIALKIPLTYMEQSVDELFLSHNGIVGLGKPTPEKIGGLMTISTPAIAVFYVPVTSGVIDYRVSSDDQGLLTKLTQDVKQVFADAVEFHGLQAVIITWTQIENAEKDGPASFQLAIVSDGISTYAIFRYESLPWSSSMGYYAQAGFVRSIGKIQTNVNSGGPDVKELVNLSNNQFGNFFIFRVSGSAIEDPKDEGADDYDYNNYDQEYEGEHPADCPKDKFVDNCPAECRTVRDERGCERCICAERPHAPRAPQEPRPELENTVEDDEDDEQVDGTRYEEPARQAQEQHHQQHHQPDQPQQQPQRSQEGSLPKMSCSQRDDKSCHANSVCQDFEGGFCCNCDTGFYGNGKECLPKGEPQRISGSFEGVINRIPIDKTELHTFATSTDGNVHTAVSKIPSDLGHPLRFLYSIGGVMGWLFADVQSPNVYNGFQLTGGLFNRTVALHIEQNYYVTIKQEFSGRNIHDYFKSHLFVSGTLPDIAPGSEVIFPDYEEEYVRERRGYLTSKAAFDVIVRDGGNVQTYRMSVDQQITFEECPNKEFDRDHSMKLHVKRINVVYNDDEGVVRYGAKNFATRSVGPAVSAPSGGHFDRRQHGQSNMASERPIEIPSQSESISTDSVCAPGRHQCTLPNMKCRVVDPSYRCECEPGYQAAHDASSHIGWICQDLDECQRGDHNCDQHAKCTNRPGSFSCQCLQGYQGDGRSCIREHQASHHEHNQQTPQEMAGVGATTEGFCTAHNQCHQWGECVFTSEHPTGRCKCRGWYVGDGVNHCGPPEENMPKHNANIPQRGGQACGSYVCDVNAECMPEPSGGSECVCKAGFSGNGVTCESLLDDRHAHSSHNRHEQQQQTGSLGKVCRSHDECSEHGSCAYHHSLGYYQCACTEPYVGNGVECTLPGSSASVPQLPSEPAVLSTASCNPNCGPDAQCVYDDHNRQYRCECYAAFMGDGYNCVPLAKPNMVPAQPKTCVESSDCHINGHCVINEHGAGEYICQCLPGFSGDGFINCRGADQCNPSNPSACYQNAHCVYDAILNAHACKCVDGFKGDGTSCVPYAPATNCNLEPRICHANAQCVMHHDTNAYECICKPGSSGDGYTKCDVIETPRCTNCSIHAYCAQNPTSGAYQCKCNAGYNGNGHLCVSMSSCLDDRSLCDENADCVPGEAGHYVCNCHYGYHGDGRSCSPESSTRSDKLLVARGMAIFERSTNPDEYGKQLIVIPHHIPVGIDFDCKEEKIVWSDMSGHSIRTSSLNGTEHKSYFNKELSSPEGIAVDWSSRNVYYADSMNDEIGVASLNGKFKKSLVTEGLVNPRSVVLDLYGRHLYYSDWHRENPYIGRVDMDGKNNRVFLNEDVHLPNGLTILPNRRELCWVDAGNHRLSCIQYNGAGRRTVFSSLQYPFGLTHDEEQKFYWTDWKDNRIHSVGVYGEGYRSFQISLGGSGKVFGILAVPKSCVGPSTPCSEDNGGCQHLCLPGQNGAVCECPDNVKVKGC | ||||||
Disulfide bond | 905↔922 | |||||
Sequence: CSEHGSCAYHHSLGYYQC | ||||||
Disulfide bond | 959↔969 | |||||
Sequence: CNPNCGPDAQC | ||||||
Disulfide bond | 963↔980 | |||||
Sequence: CGPDAQCVYDDHNRQYRC | ||||||
Disulfide bond | 1061↔1078 | |||||
Sequence: CYQNAHCVYDAILNAHAC | ||||||
Disulfide bond | 1107↔1124 | |||||
Sequence: CHANAQCVMHHDTNAYEC | ||||||
Disulfide bond | 1149↔1166 | |||||
Sequence: CSIHAYCAQNPTSGAYQC |
Keywords
- PTM
Proteomic databases
Expression
Gene expression databases
Interaction
Protein-protein interaction databases
Family & Domains
Features
Showing features for domain, region, compositional bias, repeat.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 89-230 | NIDO | ||||
Sequence: PAIAVFYVPVTSGVIDYRVSSDDQGLLTKLTQDVKQVFADAVEFHGLQAVIITWTQIENAEKDGPASFQLAIVSDGISTYAIFRYESLPWSSSMGYYAQAGFVRSIGKIQTNVNSGGPDVKELVNLSNNQFGNFFIFRVSGS | ||||||
Region | 235-259 | Disordered | ||||
Sequence: PKDEGADDYDYNNYDQEYEGEHPAD | ||||||
Region | 293-361 | Disordered | ||||
Sequence: APRAPQEPRPELENTVEDDEDDEQVDGTRYEEPARQAQEQHHQQHHQPDQPQQQPQRSQEGSLPKMSCS | ||||||
Compositional bias | 305-319 | Acidic residues | ||||
Sequence: ENTVEDDEDDEQVDG | ||||||
Compositional bias | 320-338 | Basic and acidic residues | ||||
Sequence: TRYEEPARQAQEQHHQQHH | ||||||
Compositional bias | 339-361 | Polar residues | ||||
Sequence: QPDQPQQQPQRSQEGSLPKMSCS | ||||||
Domain | 401-626 | Nidogen G2 beta-barrel | ||||
Sequence: EPQRISGSFEGVINRIPIDKTELHTFATSTDGNVHTAVSKIPSDLGHPLRFLYSIGGVMGWLFADVQSPNVYNGFQLTGGLFNRTVALHIEQNYYVTIKQEFSGRNIHDYFKSHLFVSGTLPDIAPGSEVIFPDYEEEYVRERRGYLTSKAAFDVIVRDGGNVQTYRMSVDQQITFEECPNKEFDRDHSMKLHVKRINVVYNDDEGVVRYGAKNFATRSVGPAVSA | ||||||
Region | 623-642 | Disordered | ||||
Sequence: AVSAPSGGHFDRRQHGQSNM | ||||||
Domain | 708-748 | EGF-like | ||||
Sequence: DLDECQRGDHNCDQHAKCTNRPGSFSCQCLQGYQGDGRSCI | ||||||
Domain | 832-871 | EGF-like | ||||
Sequence: GGQACGSYVCDVNAECMPEPSGGSECVCKAGFSGNGVTCE | ||||||
Domain | 895-936 | EGF-like | ||||
Sequence: LGKVCRSHDECSEHGSCAYHHSLGYYQCACTEPYVGNGVECT | ||||||
Domain | 955-994 | EGF-like | ||||
Sequence: STASCNPNCGPDAQCVYDDHNRQYRCECYAAFMGDGYNCV | ||||||
Domain | 1005-1048 | EGF-like | ||||
Sequence: QPKTCVESSDCHINGHCVINEHGAGEYICQCLPGFSGDGFINCR | ||||||
Domain | 1049-1092 | EGF-like | ||||
Sequence: GADQCNPSNPSACYQNAHCVYDAILNAHACKCVDGFKGDGTSCV | ||||||
Domain | 1096-1139 | EGF-like | ||||
Sequence: PATNCNLEPRICHANAQCVMHHDTNAYECICKPGSSGDGYTKCD | ||||||
Domain | 1142-1180 | EGF-like | ||||
Sequence: ETPRCTNCSIHAYCAQNPTSGAYQCKCNAGYNGNGHLCV | ||||||
Domain | 1181-1222 | EGF-like | ||||
Sequence: SMSSCLDDRSLCDENADCVPGEAGHYVCNCHYGYHGDGRSCS | ||||||
Repeat | 1272-1314 | LDL-receptor class B | ||||
Sequence: EKIVWSDMSGHSIRTSSLNGTEHKSYFNKELSSPEGIAVDWSS | ||||||
Repeat | 1315-1357 | LDL-receptor class B | ||||
Sequence: RNVYYADSMNDEIGVASLNGKFKKSLVTEGLVNPRSVVLDLYG | ||||||
Repeat | 1358-1402 | LDL-receptor class B | ||||
Sequence: RHLYYSDWHRENPYIGRVDMDGKNNRVFLNEDVHLPNGLTILPNR |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,527
- Mass (Da)168,397
- Last updated2009-09-22 v1
- Checksum0C16B844381DECEB
Computationally mapped potential isoform sequences
There are 2 potential isoforms mapped to this entry
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 305-319 | Acidic residues | ||||
Sequence: ENTVEDDEDDEQVDG | ||||||
Compositional bias | 320-338 | Basic and acidic residues | ||||
Sequence: TRYEEPARQAQEQHHQQHH | ||||||
Compositional bias | 339-361 | Polar residues | ||||
Sequence: QPDQPQQQPQRSQEGSLPKMSCS |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
BX284605 EMBL· GenBank· DDBJ | CBA11612.1 EMBL· GenBank· DDBJ | Genomic DNA |