C6DAW5 · ARNA_PECCP

Function

function

Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.

Catalytic activity

Pathway

Nucleotide-sugar biosynthesis; UDP-4-deoxy-4-formamido-beta-L-arabinose biosynthesis; UDP-4-deoxy-4-formamido-beta-L-arabinose from UDP-alpha-D-glucuronate: step 1/3.
Nucleotide-sugar biosynthesis; UDP-4-deoxy-4-formamido-beta-L-arabinose biosynthesis; UDP-4-deoxy-4-formamido-beta-L-arabinose from UDP-alpha-D-glucuronate: step 3/3.
Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis.

Features

Showing features for site, active site, binding site.

TypeIDPosition(s)Description
Site102Transition state stabilizer
Active site104Proton donor; for formyltransferase activity
Binding site114(6R)-10-formyltetrahydrofolate (UniProtKB | ChEBI)
Binding site136-140(6R)-10-formyltetrahydrofolate (UniProtKB | ChEBI)
Site140Raises pKa of active site His
Binding site353NAD+ (UniProtKB | ChEBI)
Binding site374-375NAD+ (UniProtKB | ChEBI)
Binding site399UDP-alpha-D-glucuronate (UniProtKB | ChEBI)
Binding site404UDP-alpha-D-glucuronate (UniProtKB | ChEBI)
Binding site438-439UDP-alpha-D-glucuronate (UniProtKB | ChEBI)
Active site440Proton acceptor; for decarboxylase activity
Binding site466UDP-alpha-D-glucuronate (UniProtKB | ChEBI)
Binding site498UDP-alpha-D-glucuronate (UniProtKB | ChEBI)
Binding site532-541UDP-alpha-D-glucuronate (UniProtKB | ChEBI)
Binding site619UDP-alpha-D-glucuronate (UniProtKB | ChEBI)
Active site625Proton donor; for decarboxylase activity

GO annotations

AspectTerm
Molecular Functioncarboxy-lyase activity
Molecular FunctionUDP-4-amino-4-deoxy-L-arabinose formyltransferase activity
Molecular FunctionUDP-glucuronic acid dehydrogenase activity
Biological Processlipid A biosynthetic process
Biological Processlipopolysaccharide biosynthetic process
Biological Processresponse to antibiotic

Keywords

Enzyme and pathway databases

    • UPA00030
    • UPA00032UER00492
    • UPA00032UER00494

Names & Taxonomy

Protein names

  • Recommended name
    Bifunctional polymyxin resistance protein ArnA

Including 2 domains:

  • Recommended name
    UDP-4-amino-4-deoxy-L-arabinose formyltransferase
  • EC number
  • Alternative names
    • ArnAFT
    • UDP-L-Ara4N formyltransferase
  • Recommended name
    UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating
  • EC number
  • Alternative names
    • ArnADH
    • UDP-GlcUA decarboxylase
    • UDP-glucuronic acid dehydrogenase

Gene names

    • Name
      arnA
    • Ordered locus names
      PC1_2926

Organism names

Accessions

  • Primary accession
    C6DAW5

Proteomes

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_10002137301-672Bifunctional polymyxin resistance protein ArnA

Interaction

Subunit

Homohexamer, formed by a dimer of trimers.

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region.

TypeIDPosition(s)Description
Region1-310Formyltransferase ArnAFT
Region320-672Dehydrogenase ArnADH

Sequence similarities

In the N-terminal section; belongs to the Fmt family. UDP-L-Ara4N formyltransferase subfamily.
In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    672
  • Mass (Da)
    75,416
  • Last updated
    2009-09-01 v1
  • Checksum
    28BE7F5CBE4EB584
MKAIVFAYHDIGCVGLEALKLAGYEIQAVFTHSDAPGENHFYASVAKAAAEMDVPVFAPEDVNHPLWVNRIRELAPDVIFSFYYRTLLSDDILQLPSFGAFNLHGSLLPRYRGRAPVNWVLVNGETQTGVTLHKMVSRADAGDIVAQSVVEIDDEDTALTLHGKCRTTAAALLAQQLPLIRSREIMLTPQDESQASYFGRRTAADGLIDWQKSAREINNLIRAVTEPYPGAFTFLGERKVVIWRARVLKNDSVKANGVKQEPGSIISTSPLVVSCGEDALEIVSGQSESGLYMSGSRLAAEMGMVPQAKLGNLASRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFLGDPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPSTSEVYGMCDDKEFDEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKNGLRFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDGIEALFRIIENRNGQCDGQIINIGNPHNEASIRELGDMLLTSFNAHPLRDRFPPFAGFIEVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRTVDPQHADNVTDTQG

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP001657
EMBL· GenBank· DDBJ
ACT13949.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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