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C4YUC4 · C4YUC4_9RICK
Protein
DNA topoisomerase 1
Gene
topA
Status
UniProtKB unreviewed (TrEMBL)
Organism
Rickettsia endosymbiont of Ixodes scapularis
Amino acids
770
(go to sequence)
Protein existence
Inferred from homology
Annotation score
3/5
Entry
Variant viewer
Feature viewer
Genomic coordinates
Publications
External links
History
External Links
Enzyme and pathway databases
ENZYME
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Phylogenomic databases
HOGENOM
CLU_002929_4_3_5
Family and domain databases
CDD
cd00186
TOP1Ac 1 hit
cd03363
TOPRIM_TopoIA_TopoI 1 hit
Gene3D
3.40.50.140
1 hit
3.30.65.10
Bacterial Topoisomerase I, domain 1 1 hit
1.10.460.10
Topoisomerase I, domain 2 1 hit
2.70.20.10
Topoisomerase I, domain 3 1 hit
1.10.290.10
Topoisomerase I, domain 4 1 hit
HAMAP
MF_00952
Topoisom_1_prok 1 hit
InterPro
View protein in InterPro
IPR000380
Topo_IA
IPR003601
Topo_IA_2
IPR023406
Topo_IA_AS
IPR013497
Topo_IA_cen
More InterPro links
NCBIfam
TIGR01051
topA_bact 1 hit
PANTHER
PTHR42785:SF1
DNA TOPOISOMERASE 1 hit
PTHR42785
DNA TOPOISOMERASE, TYPE IA, CORE 1 hit
PRINTS
PR00417
PRTPISMRASEI
PROSITE
View protein in PROSITE
PS00396
TOPOISOMERASE_I_PROK 1 hit
PS50880
TOPRIM 1 hit
Pfam
View protein in Pfam
PF01131
Topoisom_bac 1 hit
PF01751
Toprim 1 hit
PF13368
Toprim_C_rpt 2 hits
PF01396
zf-C4_Topoisom 1 hit
SMART
View protein in SMART
SM00437
TOP1Ac 1 hit
SM00436
TOP1Bc 1 hit
SM00493
TOPRIM 1 hit
SUPFAM
SSF56712
Prokaryotic type I DNA topoisomerase 1 hit
SSF57783
Zinc beta-ribbon 1 hit
MobiDB
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Sequence databases
RefSeq
WP_008580070.1
NZ_CM000770.1
Nucleotide Sequence
Protein Sequence
Molecule Type
Status
CM000770
EMBL
·
GenBank
·
DDBJ
EER21844.1
EMBL
·
GenBank
·
DDBJ
Genomic DNA
3D structure databases
AlphaFoldDB
C4YUC4
ModBase
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