C0JBY2 · C0JBY2_9TRYP

  • Protein
    Nuclear non-canonical poly(A) polymerase 1
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Predicted
  • Annotation score
    1/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular Functionpoly(A) RNA polymerase activity
Biological ProcessRNA metabolic process

Names & Taxonomy

Protein names

  • Submitted names
    • Nuclear non-canonical poly(A) polymerase 1

Organism names

Accessions

  • Primary accession
    C0JBY2

Organism-specific databases

Structure

Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Source Identifier Method Resolution Chain Positions Links
AlphaFold AF-C0JBY2-F1 Predicted 1-746 AlphaFold · Foldseek

3D structure databases

Family & Domains

Features

Showing features for region, domain, compositional bias.

TypeIDPosition(s)Description
Region1-68Disordered
Domain518-574PAP-associated
Region565-589Disordered
Region701-746Disordered
Compositional bias706-727Basic and acidic residues
Compositional bias728-746Polar residues

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    746
  • Mass (Da)
    81,762
  • Last updated
    2009-05-05 v1
  • Checksum
    7FC20038534D56B0
MKDRSAAVHVGSEDVPTARARGATRNKATSSKNRPGRTPICGKDAEENALADEPAKPTSPVAVDSSDAAVDRCGSVSARNRAGDAITNKRSKVVDIPPPAPSVGLFSKFQERRGDFSSDWMLLQEENAANQPSEPPIAAELVMKLRERQAQMQISRDEVTLKTTGSSAVKNRDEGRLEALNEELRKQGADDGKSDSDVEYVPQEDTRGYRSLKQQGGEETTVVGSAVAAPSTNSDEAEKGFLDDFLGFSKGDSEKNADSRYAVQATVTLKNGKCVLASDEVSSGQGGYDPGHSYLGEETRSVPLWCVGRLTGQKEYAKDAAIALHQEIWDFVKFHQPTEAEIAIRCLVEAEVVTIAKQLWPKCEPVVFGSMATGLLLPLSDVDITILNVDVPTEEALRLLAREISLSGICNTAYPQLVLKAKVPLLKFQHCGSLLDVDISINARDGPRNTLIVIDLLKHYREAEPLIVVVKYFLHQRGMDEPYHGGLGSFALTLMAISFLQQHPIYTGSPDQRLYCGLGRLLVDFFRYYGMYFRYDRCGLSVVGTGRCFKRTDVCASSVRPMTNGANSSLGRGGPQSGPPQVLLEDPGCPENNAASSLRNFNVIATSFTHAFRALTAVFEPNRRPGSSSPDALHIDQRPTLLSRILHVDGESVKRRQAIIEAHGSLLQDPNGRLVLQQVVDEHKQRRERMLENVSLLSCPPTSDRLVSHKRPREDSNEDKFSKSRRGDSCSSNDSSVRTARSLTRR

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias706-727Basic and acidic residues
Compositional bias728-746Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
FJ178779
EMBL· GenBank· DDBJ
ACN51269.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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