C0ILN4 · C0ILN4_COFCA
- ProteinVps72/YL1 C-terminal domain-containing protein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids359 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | Swr1 complex | |
Molecular Function | ATP-dependent H2AZ histone chaperone activity | |
Biological Process | transcription initiation-coupled chromatin remodeling |
Names & Taxonomy
Protein names
- Recommended nameVps72/YL1 C-terminal domain-containing protein
Gene names
Organism names
- Taxonomic lineagecellular organisms > Eukaryota (eucaryotes) > Viridiplantae > Streptophyta > Streptophytina > Embryophyta > Tracheophyta > Euphyllophyta > Spermatophyta > Magnoliopsida (flowering plants) > Mesangiospermae > eudicotyledons > Gunneridae > Pentapetalae > asterids > lamiids > Gentianales > Rubiaceae > Ixoroideae > Gardenieae complex > Bertiereae - Coffeeae clade > Coffeeae > Coffea
Accessions
- Primary accessionC0ILN4
Subcellular Location
UniProt Annotation
GO Annotation
Structure
Family & Domains
Features
Showing features for region, compositional bias, coiled coil, domain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Region | 46-143 | Disordered | |||
Compositional bias | 52-84 | Acidic residues | |||
Compositional bias | 96-114 | Basic residues | |||
Compositional bias | 115-143 | Basic and acidic residues | |||
Coiled coil | 179-213 | ||||
Domain | 266-295 | Vps72/YL1 C-terminal | |||
Region | 303-329 | Disordered | |||
Sequence similarities
Belongs to the VPS72/YL1 family.
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length359
- Mass (Da)41,838
- Last updated2009-05-05 v1
- Checksum67D43FC06CAE7288
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 52-84 | Acidic residues | |||
Compositional bias | 96-114 | Basic residues | |||
Compositional bias | 115-143 | Basic and acidic residues | |||
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
EU164537 EMBL· GenBank· DDBJ | ABZ89176.1 EMBL· GenBank· DDBJ | Genomic DNA |