B9EWH8 · B9EWH8_ORYSJ

Function

function

Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular Functionminor groove of adenine-thymine-rich DNA binding

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    AT-hook motif nuclear-localized protein

Gene names

    • ORF names
      OSNPB_010953801
      , P0431G06.28
    • Ordered locus names
      Os01g0953801

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    B9EWH8
  • Secondary accessions
    • Q941Y9

Proteomes

Genome annotation databases

Subcellular Location

Keywords

  • Cellular component

PTM/Processing

Proteomic databases

Structure

Family & Domains

Features

Showing features for region, domain, compositional bias.

TypeIDPosition(s)Description
Region1-48Disordered
Domain51-194PPC
Compositional bias175-196Basic and acidic residues
Region175-206Disordered

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    265
  • Mass (Da)
    26,638
  • Last updated
    2020-02-26 v1
  • Checksum
    1BB4ED3E30AD6CAA
MADEGSSRAELIEASPAPALDLPSPPRKPRGRPLGSKNKPKPPVVVTRESEAAMRPVVLELGAGCEVAAAVAAFARRRRVGVSVLCGRGTVAAVTLRLPTSPPAAVKLHGRFEVLSLSGTVLPSAAGEGAAPPPPFSVSLAGAGGQVIGGTLAGEMTTADGLVVVAATFGSAEVHRLPADEDDEATGSRGGEERRHPQQQPPQTVAATSAVDVGLLGYGGGVGVAGGASGGQVGRHQQQQQQAEMVLWAQSPGSVGPAHPATSRY

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias175-196Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AP003683
EMBL· GenBank· DDBJ
BAB64709.1
EMBL· GenBank· DDBJ
Genomic DNA
AP014957
EMBL· GenBank· DDBJ
BAS76268.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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