B8A5T6 · B8A5T6_DANRE

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentCul2-RING ubiquitin ligase complex
Molecular Functionzinc ion binding

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Zinc finger SWIM domain-containing protein 8
    • Zinc finger, SWIM-type-containing 8

Gene names

    • Name
      zswim8
    • Synonyms
      wu:fc49c05
      , wu:fi39c11
      , zgc:113421

Organism names

  • Taxonomic identifier
  • Strain
    • Tuebingen
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    B8A5T6
  • Secondary accessions
    • A0A8M1NTC9

Proteomes

    • Identifier
    • Component
      Alternate scaffold 13, Chromosome 13

Organism-specific databases

Subcellular Location

PTM/Processing

Proteomic databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain, compositional bias, region.

TypeIDPosition(s)Description
Domain162-198SWIM-type
Compositional bias512-544Polar residues
Region512-550Disordered
Region582-645Disordered
Compositional bias585-624Polar residues
Compositional bias731-745Acidic residues
Region731-783Disordered
Region1082-1308Disordered
Compositional bias1084-1141Polar residues
Compositional bias1148-1180Polar residues
Compositional bias1223-1241Polar residues
Compositional bias1251-1279Polar residues
Region1507-1532Disordered

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,912
  • Mass (Da)
    205,871
  • Last updated
    2009-03-03 v1
  • Checksum
    F3C2F7C08AB3AA25
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKDGQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGSPDEFQRGEQLYRVRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTCGAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLEILTEQCLTHEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCDEMVVLWRLAVLDPTMSPQRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVECCYFNWEVAYPLPGITYCNADKKNVSFCWARAMQQQRGLKAINSSEAGEGARSGTSEGNSLEHKSRSNSHLPQQEVAVRPKETIVSKRKVVSNVNSGSVLVCLGSRVPLSLPDGSKSMYKTTNSSPSAGTKAKLTQSSKGSCGSSSGVSGKHPSAKRRTSSEDSSLEPDMAELNLDDGSSMALGAEACNTFDFLPPPPEMLPSPSTLLQKPLKYSSNSKERAFETKRVPHAADAHACFSKESSIAAPVVAAMEKEVEVEADLDENGGDEDVIDDAGPSDSLPSKAQRGHGEGDGAGASGAPGPQVAEAAAGADAVGEDDYQAYYLSAASEEGAERGVADSNHEEEPDIFAGIKPLEQEGRMEVLFACAEALYAHGYSNEACRLAVDLARDLLANPPDLKVEQPQTKGKKSKVSTTKQTQVATNTLSKVAFLLTVLSERLELHNLAFNTGMFSLELQRPPASTKALEVKLAYQESEVVALLKKIPLGIVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPATSSQKSPSKHATHGASGATGGVSKHTPTATSTAVQGMTSGGAAGQQGGLAGGVQSTASGESISDNRDQEGAQSTSCDQQSEAAPFKPEGTVPSRLALGGRGAYGTRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPIRGGWTATSWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGSQREGSGRCGANGGAGRTPPEGGCGILDNTGALDSSGVSAVTTTVTAAAVVPVISVGSTIYQSHALPGSAMAHTQGLHPYTTIQTHLPTVCTPQYLGHPLQHVPRPAVFPVSGAAYPQGMHPAFIGAQYPFSVATGPHPPLAATAVTFPGVPVPSMTQIAVHPYHTAEAALPLTTTVAGGVHAGAAIQAIQGASLPGLSSQPPSLVSAPFPVEDEQHSQPISQQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNHVYQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPADYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP

Computationally mapped potential isoform sequences

There are 4 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A8M2B3M7A0A8M2B3M7_DANREzswim81933
A0A8M9QN79A0A8M9QN79_DANREzswim81771
A0A0R4IMH7A0A0R4IMH7_DANREzswim81932
A0A8M2B3H4A0A8M2B3H4_DANREzswim81913

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias512-544Polar residues
Compositional bias585-624Polar residues
Compositional bias731-745Acidic residues
Compositional bias1084-1141Polar residues
Compositional bias1148-1180Polar residues
Compositional bias1223-1241Polar residues
Compositional bias1251-1279Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
BX649428
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp