B8A5T6 · B8A5T6_DANRE
- ProteinZinc finger SWIM domain-containing protein 8
- Genezswim8
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1912 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | Cul2-RING ubiquitin ligase complex | |
Molecular Function | zinc ion binding |
Keywords
- Ligand
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio
Accessions
- Primary accessionB8A5T6
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for domain, compositional bias, region.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 162-198 | SWIM-type | ||||
Sequence: YNVAVMFDRCRITSCSCTCGAGAKWCAHVVALCLFRI | ||||||
Compositional bias | 512-544 | Polar residues | ||||
Sequence: INSSEAGEGARSGTSEGNSLEHKSRSNSHLPQQ | ||||||
Region | 512-550 | Disordered | ||||
Sequence: INSSEAGEGARSGTSEGNSLEHKSRSNSHLPQQEVAVRP | ||||||
Region | 582-645 | Disordered | ||||
Sequence: PDGSKSMYKTTNSSPSAGTKAKLTQSSKGSCGSSSGVSGKHPSAKRRTSSEDSSLEPDMAELNL | ||||||
Compositional bias | 585-624 | Polar residues | ||||
Sequence: SKSMYKTTNSSPSAGTKAKLTQSSKGSCGSSSGVSGKHPS | ||||||
Compositional bias | 731-745 | Acidic residues | ||||
Sequence: DLDENGGDEDVIDDA | ||||||
Region | 731-783 | Disordered | ||||
Sequence: DLDENGGDEDVIDDAGPSDSLPSKAQRGHGEGDGAGASGAPGPQVAEAAAGAD | ||||||
Region | 1082-1308 | Disordered | ||||
Sequence: SQTHKPQTLSSFYSSKPATSSQKSPSKHATHGASGATGGVSKHTPTATSTAVQGMTSGGAAGQQGGLAGGVQSTASGESISDNRDQEGAQSTSCDQQSEAAPFKPEGTVPSRLALGGRGAYGTRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPIRGGWTATSWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPECHAPHVPN | ||||||
Compositional bias | 1084-1141 | Polar residues | ||||
Sequence: THKPQTLSSFYSSKPATSSQKSPSKHATHGASGATGGVSKHTPTATSTAVQGMTSGGA | ||||||
Compositional bias | 1148-1180 | Polar residues | ||||
Sequence: LAGGVQSTASGESISDNRDQEGAQSTSCDQQSE | ||||||
Compositional bias | 1223-1241 | Polar residues | ||||
Sequence: IDSSAPETTSDSSPTLSRR | ||||||
Compositional bias | 1251-1279 | Polar residues | ||||
Sequence: SWGRGQDSDSISSSSSDSLGSSSSSGSRR | ||||||
Region | 1507-1532 | Disordered | ||||
Sequence: GGSGSQREGSGRCGANGGAGRTPPEG |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,912
- Mass (Da)205,871
- Last updated2009-03-03 v1
- ChecksumF3C2F7C08AB3AA25
Computationally mapped potential isoform sequences
There are 4 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A8M2B3M7 | A0A8M2B3M7_DANRE | zswim8 | 1933 | ||
A0A8M9QN79 | A0A8M9QN79_DANRE | zswim8 | 1771 | ||
A0A0R4IMH7 | A0A0R4IMH7_DANRE | zswim8 | 1932 | ||
A0A8M2B3H4 | A0A8M2B3H4_DANRE | zswim8 | 1913 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 512-544 | Polar residues | ||||
Sequence: INSSEAGEGARSGTSEGNSLEHKSRSNSHLPQQ | ||||||
Compositional bias | 585-624 | Polar residues | ||||
Sequence: SKSMYKTTNSSPSAGTKAKLTQSSKGSCGSSSGVSGKHPS | ||||||
Compositional bias | 731-745 | Acidic residues | ||||
Sequence: DLDENGGDEDVIDDA | ||||||
Compositional bias | 1084-1141 | Polar residues | ||||
Sequence: THKPQTLSSFYSSKPATSSQKSPSKHATHGASGATGGVSKHTPTATSTAVQGMTSGGA | ||||||
Compositional bias | 1148-1180 | Polar residues | ||||
Sequence: LAGGVQSTASGESISDNRDQEGAQSTSCDQQSE | ||||||
Compositional bias | 1223-1241 | Polar residues | ||||
Sequence: IDSSAPETTSDSSPTLSRR | ||||||
Compositional bias | 1251-1279 | Polar residues | ||||
Sequence: SWGRGQDSDSISSSSSDSLGSSSSSGSRR |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
BX649428 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. |