B7F8Y4 · B7F8Y4_ORYSJ
- ProteincDNA, clone: J065191F09, full insert sequence
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids458 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score1/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Molecular Function | DNA-binding transcription factor activity |
Names & Taxonomy
Protein names
- Submitted names
Organism names
- Taxonomic lineagecellular organisms > Eukaryota (eucaryotes) > Viridiplantae > Streptophyta > Streptophytina > Embryophyta > Tracheophyta > Euphyllophyta > Spermatophyta > Magnoliopsida (flowering plants) > Mesangiospermae > Liliopsida (monocotyledons) > Petrosaviidae > commelinids > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa (Rice)
Accessions
- Primary accessionB7F8Y4
Genome annotation databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-103 | Disordered | ||||
Sequence: MGDAGGHSHHHQHGFQPQLLSFGGVGHHHHLHQFTAQPQPPAASHTRGRGGGGEIVPATTTPRSRGGGGGGGGEIVAVQGGHIVRSTGRKDRHSKVCTARGPR | ||||||
Compositional bias | 85-103 | Basic and acidic residues | ||||
Sequence: RSTGRKDRHSKVCTARGPR | ||||||
Domain | 89-147 | TCP | ||||
Sequence: RKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKDAIDKL | ||||||
Region | 159-182 | Disordered | ||||
Sequence: GAGAGNAAAPPSSSTHPDSAENSD | ||||||
Compositional bias | 166-182 | Polar residues | ||||
Sequence: AAPPSSSTHPDSAENSD | ||||||
Region | 278-299 | Disordered | ||||
Sequence: MFHHQQHRHGGGGGGGNGTTQQ | ||||||
Region | 424-458 | Disordered | ||||
Sequence: RLPARIQGDEEHNGGGGGNGDKPPPPSSVSSASHH |
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length458
- Mass (Da)47,120
- Last updated2009-02-10 v1
- Checksum50EA0C32E580C3E7
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 85-103 | Basic and acidic residues | ||||
Sequence: RSTGRKDRHSKVCTARGPR | ||||||
Compositional bias | 166-182 | Polar residues | ||||
Sequence: AAPPSSSTHPDSAENSD |
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AK241658 EMBL· GenBank· DDBJ | BAH01082.1 EMBL· GenBank· DDBJ | mRNA |