B6TWJ1 · CSPLF_MAIZE

  • Protein
    CASP-like protein 4A1
  • Status
    UniProtKB reviewed (Swiss-Prot)
  • Amino acids
  • Protein existence
    Evidence at transcript level
  • Annotation score
    2/5

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentplasma membrane

Protein family/group databases

    • 9.B.56.1.3the bacterial disease resistance and oomycete disease susceptibility protein, pimp1 (pimp1) family

Names & Taxonomy

Protein names

  • Recommended name
    CASP-like protein 4A1
  • Short names
    ZmCASPL4A1
  • Alternative names
    • UL36 tegument protein

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > PACMAD clade > Panicoideae > Andropogonodae > Andropogoneae > Tripsacinae > Zea

Accessions

  • Primary accession
    B6TWJ1
  • Secondary accessions
    • B6TEL6

Proteomes

Subcellular Location

Cell membrane
; Multi-pass membrane protein

Features

Showing features for topological domain, transmembrane.

Type
IDPosition(s)Description
Topological domain1-158Cytoplasmic
Transmembrane159-179Helical
Topological domain180-201Extracellular
Transmembrane202-222Helical
Topological domain223-242Cytoplasmic
Transmembrane243-260Helical
Topological domain261-277Extracellular
Transmembrane278-298Helical
Topological domain299-306Cytoplasmic

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00003915771-306CASP-like protein 4A1

Expression

Gene expression databases

Interaction

Subunit

Homodimer and heterodimers.

Protein-protein interaction databases

Family & Domains

Features

Showing features for compositional bias, region.

Type
IDPosition(s)Description
Compositional bias1-15Polar residues
Region1-142Disordered
Compositional bias95-132Pro residues

Sequence similarities

Keywords

Phylogenomic databases

Family and domain databases

Sequence & Isoform

Align isoforms (2)
  • Sequence status
    Complete

This entry describes 2 isoforms produced by Alternative splicing.

B6TWJ1-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    306
  • Mass (Da)
    32,779
  • Last updated
    2010-02-09 v2
  • Checksum
    8E03BB8825729A63
MALQAQQQPTPSPTRDRVGSGEWLADTEKLPGAAASPEDVVVASTHHAAAAARYVPPRATSHTAEPNPGRDGGGGWYSWNGARRARHDPPAPRRQQPAKTHPPAPPLPAAPPPPPPPPPAASPAPAPRAPPPHAQVRSADRVVPAILSRKRRAAVMQRAALLARAAAAGXXLAALTVLAADTRRGWARDSYSNYAQFRYSEAVNVVGFLYSVFQFVALAELMRRNTHLIPHPKRGLFDFTMDQVLAYLLISSSSSATARASDLTENWGSDSFPNMANGSIAISFVAFVVFAICSLISAYNLFRRDM

B6TWJ1-2

  • Name
    2
  • See also
    sequence in UniParc or sequence clusters in UniRef
  • Differences from canonical

Features

Showing features for compositional bias, alternative sequence, sequence conflict.

Type
IDPosition(s)Description
Compositional bias1-15Polar residues
Alternative sequenceVSP_03873155-199in isoform 2
Compositional bias95-132Pro residues
Sequence conflict306in Ref. 1; ACG35549

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
EU963431
EMBL· GenBank· DDBJ
ACG35549.1
EMBL· GenBank· DDBJ
mRNA
EU969356
EMBL· GenBank· DDBJ
ACG41474.1
EMBL· GenBank· DDBJ
mRNA

Similar Proteins

Disclaimer

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