B4DJK4 · B4DJK4_HUMAN
- ProteincDNA FLJ54005, highly similar to Transcription elongation factor SPT5
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids879 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score1/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | DSIF complex | |
Molecular Function | mRNA binding | |
Molecular Function | translation elongation factor activity | |
Biological Process | regulation of DNA-templated transcription elongation | |
Biological Process | regulation of transcription by RNA polymerase II | |
Biological Process | transcription elongation by RNA polymerase II |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Submitted names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionB4DJK4
Subcellular Location
UniProt Annotation
GO Annotation
Keywords
- Cellular component
PTM/Processing
Proteomic databases
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-23 | Acidic residues | ||||
Sequence: MSDSEDSNFSEEEDSERSSDGEE | ||||||
Region | 1-30 | Disordered | ||||
Sequence: MSDSEDSNFSEEEDSERSSDGEEAEVDEER | ||||||
Domain | 64-91 | KOW | ||||
Sequence: NLKPKSWVRLKRGIYKDDIAQVDYVEPS | ||||||
Domain | 211-238 | KOW | ||||
Sequence: NFQPGDNVEVCEGELINLQGKILSVDGN | ||||||
Domain | 263-290 | KOW | ||||
Sequence: YFKMGDHVKVIAGRFEGDTGLIVRVEEN | ||||||
Domain | 385-412 | KOW | ||||
Sequence: NIHVKDIVKVIDGPHSGREGEIRHLFRS | ||||||
Region | 462-492 | Disordered | ||||
Sequence: SSPMHPSAGGQRGGFGSPGGGSGGMSRGRGR | ||||||
Domain | 495-522 | KOW | ||||
Sequence: NELIGQTVRISQGPYKGYIGVVKDATES | ||||||
Compositional bias | 539-623 | Polar residues | ||||
Sequence: RQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSR | ||||||
Region | 539-770 | Disordered | ||||
Sequence: RQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNSSD | ||||||
Domain | 564-700 | Spt5 C-terminal | ||||
Sequence: GSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP | ||||||
Compositional bias | 642-664 | Pro residues | ||||
Sequence: AYGGTPNPQTPGYPDPSSPQVNP | ||||||
Compositional bias | 665-739 | Polar residues | ||||
Sequence: QYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSP | ||||||
Compositional bias | 740-754 | Pro residues | ||||
Sequence: VGYSPMTPGAPSPGG | ||||||
Domain | 826-853 | KOW | ||||
Sequence: TPTKNNKVKVILGEDREATGVLLSIDGE |
Family and domain databases
Sequence
- Sequence statusComplete
- Length879
- Mass (Da)96,915
- Last updated2008-09-23 v1
- ChecksumCA3A7C258EFBDC9C
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-23 | Acidic residues | ||||
Sequence: MSDSEDSNFSEEEDSERSSDGEE | ||||||
Compositional bias | 539-623 | Polar residues | ||||
Sequence: RQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSR | ||||||
Compositional bias | 642-664 | Pro residues | ||||
Sequence: AYGGTPNPQTPGYPDPSSPQVNP | ||||||
Compositional bias | 665-739 | Polar residues | ||||
Sequence: QYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSP | ||||||
Compositional bias | 740-754 | Pro residues | ||||
Sequence: VGYSPMTPGAPSPGG |