B0BNB1 · B0BNB1_RAT

  • Protein
    COMM domain-containing protein 1
  • Gene
    Commd1
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Evidence at transcript level
  • Annotation score
    4/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentCul2-RING ubiquitin ligase complex
Cellular Componentcytoplasm
Cellular Componentearly endosome
Cellular Componentendosome
Cellular Componentnucleus
Cellular Componentrecycling endosome
Molecular Functioncopper ion binding
Molecular Functionidentical protein binding
Molecular Functionphosphatidic acid binding
Molecular Functionphosphatidylinositol-3,4,5-trisphosphate binding
Molecular Functionphosphatidylinositol-3,4-bisphosphate binding
Molecular Functionphosphatidylinositol-3,5-bisphosphate binding
Molecular Functionphosphatidylinositol-4,5-bisphosphate binding
Molecular Functionprotein homodimerization activity
Molecular Functionsodium channel inhibitor activity
Biological Processcholesterol homeostasis
Biological Processcopper ion homeostasis
Biological ProcessGolgi to plasma membrane transport
Biological Processlow-density lipoprotein particle clearance
Biological Processnegative regulation of hypoxia-inducible factor-1alpha signaling pathway
Biological Processnegative regulation of protein localization to cell surface
Biological Processnegative regulation of sodium ion transmembrane transport
Biological Processnucleotide-excision repair
Biological Processplasma membrane to endosome transport
Biological Processpositive regulation of cholesterol import
Biological Processpositive regulation of endosome to plasma membrane protein transport
Biological Processpositive regulation of protein localization to cell surface
Biological Processpositive regulation of protein ubiquitination
Biological Processprotein destabilization
Biological Processprotein localization to cell surface
Biological Processregulation of plasma lipoprotein particle levels
Biological Processregulation of proteasomal ubiquitin-dependent protein catabolic process

Names & Taxonomy

Protein names

  • Recommended name
    COMM domain-containing protein 1

Gene names

    • Name
      Commd1
    • ORF names
      rCG_23272

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • BN
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Rattus

Accessions

  • Primary accession
    B0BNB1

Proteomes

Organism-specific databases

PTM/Processing

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain117-185COMM

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    188
  • Mass (Da)
    21,037
  • Last updated
    2008-02-26 v1
  • Checksum
    92DDD157FBCA8FD5
MAGELESCKSLSGLLSGLAQNTFHGHSGITEELLHSQLYPEVPLEEFRPFLAKMRGILKSIASADMDFNQLEAFLTAQTKKQGGITSEQAAVISKFWKSHKTKIRESLMSQSRWDNGLRGLRWRVDGKSQSRHSTQIHSPVAIIELEFGRSGRESEFLCLEFDEAKVKQILKKLSEVEESISGLMQAA

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
BC158752
EMBL· GenBank· DDBJ
AAI58753.1
EMBL· GenBank· DDBJ
mRNA
CH473996
EMBL· GenBank· DDBJ
EDL97978.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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