A9UGV6 · APEP2_ORYSJ

Function

function

Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentaleurone grain membrane
Cellular Componentside of membrane
Cellular Componentvacuole

Names & Taxonomy

Protein names

  • Recommended name
    Arabinogalactan peptide 2
  • Short names
    OsAGPEP2

Gene names

    • Name
      AGPEP2
    • ORF names
      B1064G04.42, OsJ_02235
    • Ordered locus names
      Os01g0559900, LOC_Os01g37950

Organism names

  • Taxonomic identifier
  • Strains
    • cv. Koshihikari
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    A9UGV6
  • Secondary accessions
    • Q5JKP8

Proteomes

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for signal, chain, lipidation, propeptide.

Type
IDPosition(s)Description
Signal1-26
ChainPRO_000039789227-36Arabinogalactan peptide 2
Lipidation36GPI-anchor amidated serine
PropeptidePRO_000039789337-61Removed in mature form

Post-translational modification

O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.

Keywords

Proteomic databases

Expression

Tissue specificity

Expressed in roots, stems, leaves, flowers and seeds.

Interaction

Protein-protein interaction databases

Family & Domains

Sequence similarities

Belongs to the AG-peptide AGP family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    61
  • Mass (Da)
    5,688
  • Last updated
    2008-02-05 v1
  • MD5 Checksum
    894730EADC0B85EC22ECF7EA60C09461
MARFSAAAVIAFAVVAAAALATVASAADAPAPAPTSGAVAAVSAPLSVCCVAGLLLALLRH

Sequence caution

The sequence BAD87959.1 differs from that shown. Reason: Erroneous gene model prediction

Features

Showing features for sequence conflict.

TypeIDPosition(s)Description
Sequence conflict7in Ref. 7; AK243203

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
EU282463
EMBL· GenBank· DDBJ
ABX83035.1
EMBL· GenBank· DDBJ
Genomic DNA
AP003924
EMBL· GenBank· DDBJ
BAD87959.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
AP008207
EMBL· GenBank· DDBJ
BAF05260.2
EMBL· GenBank· DDBJ
Genomic DNA
AP014957
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CM000138
EMBL· GenBank· DDBJ
EEE54815.1
EMBL· GenBank· DDBJ
Genomic DNA
AK243203
EMBL· GenBank· DDBJ
-mRNA No translation available.

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
Help