A9NKX0 · A9NKX0_PICSI
- ProteinChlorophyll a-b binding protein, chloroplastic
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids288 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
function
The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
Features
Showing features for binding site.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Binding site | 150 | chlorophyll a 3 (UniProtKB | ChEBI) | ||||
Sequence: E | ||||||
Binding site | 153 | chlorophyll a 1 (UniProtKB | ChEBI) | ||||
Sequence: H | ||||||
Binding site | 155 | Mg (UniProtKB | ChEBI) of chlorophyll b 1 (UniProtKB | ChEBI); axial binding residue | ||||
Sequence: R | ||||||
Binding site | 213 | Mg (UniProtKB | ChEBI) of chlorophyll b 1 (UniProtKB | ChEBI); axial binding residue | ||||
Sequence: E | ||||||
Binding site | 252 | chlorophyll a 1 (UniProtKB | ChEBI) | ||||
Sequence: E | ||||||
Binding site | 257 | chlorophyll a 1 (UniProtKB | ChEBI) | ||||
Sequence: R | ||||||
Binding site | 269 | chlorophyll a 1 (UniProtKB | ChEBI) | ||||
Sequence: Q |
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | chloroplast envelope | |
Cellular Component | chloroplast thylakoid membrane | |
Cellular Component | photosystem I | |
Cellular Component | photosystem II | |
Cellular Component | plastoglobule | |
Molecular Function | chlorophyll binding | |
Biological Process | photosynthesis, light harvesting in photosystem I | |
Biological Process | response to light stimulus |
Keywords
- Biological process
- Ligand
Names & Taxonomy
Protein names
- Recommended nameChlorophyll a-b binding protein, chloroplastic
Organism names
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Pinopsida > Pinidae > Conifers I > Pinales > Pinaceae > Picea
Accessions
- Primary accessionA9NKX0
Subcellular Location
UniProt Annotation
GO Annotation
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transmembrane | 156-176 | Helical | ||||
Sequence: WAMLGVLGALAVEGFTGIYWQ | ||||||
Transmembrane | 188-212 | Helical | ||||
Sequence: SYFGFSLPFNMSTLILIEVLLLGYI | ||||||
Transmembrane | 255-272 | Helical | ||||
Sequence: HARLAMVAFLIFAIQAAV |
Keywords
- Cellular component
Structure
Family & Domains
Features
Showing features for region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 43-67 | Disordered | ||||
Sequence: KKKTKAVAKPKPKPKPKPRAPTGRP | ||||||
Compositional bias | 46-60 | Basic residues | ||||
Sequence: TKAVAKPKPKPKPKP |
Sequence similarities
Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length288
- Mass (Da)31,530
- Last updated2008-02-05 v1
- Checksum5F388BF7C9707CD2
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 46-60 | Basic residues | ||||
Sequence: TKAVAKPKPKPKPKP |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
EF081901 EMBL· GenBank· DDBJ | ABK21281.1 EMBL· GenBank· DDBJ | mRNA | ||
EF082523 EMBL· GenBank· DDBJ | ABK21880.1 EMBL· GenBank· DDBJ | mRNA | ||
EF084603 EMBL· GenBank· DDBJ | ABK23915.1 EMBL· GenBank· DDBJ | mRNA | ||
EF087020 EMBL· GenBank· DDBJ | ABK26276.1 EMBL· GenBank· DDBJ | mRNA | ||
BT070240 EMBL· GenBank· DDBJ | ACN39760.1 EMBL· GenBank· DDBJ | mRNA | ||
BT070776 EMBL· GenBank· DDBJ | ACN40276.1 EMBL· GenBank· DDBJ | mRNA |