A9JRG6 · A9JRG6_DANRE

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentactin cytoskeleton
Cellular Componentcytoplasm
Cellular Componentstress fiber
Molecular Functionactin filament binding
Molecular Functionmetal ion binding
Biological Processcilium assembly
Biological Processcytoskeleton organization
Biological Processlamellipodium assembly

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Actin-binding LIM protein 1
    • Zgc:172321 protein

Gene names

    • Name
      ablim1a
    • Synonyms
      ablim1
      , zgc:172321

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    A9JRG6

Proteomes

Organism-specific databases

Subcellular Location

Keywords

PTM/Processing

Keywords

Family & Domains

Features

Showing features for domain, region, compositional bias.

TypeIDPosition(s)Description
Domain48-107LIM zinc-binding
Domain108-167LIM zinc-binding
Domain185-244LIM zinc-binding
Region297-331Disordered
Compositional bias312-330Polar residues
Compositional bias375-399Basic and acidic residues
Region375-524Disordered
Compositional bias422-470Polar residues
Compositional bias498-521Basic and acidic residues
Region551-591Disordered
Compositional bias554-571Polar residues
Region604-623Disordered
Domain625-693HP

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    693
  • Mass (Da)
    78,828
  • Last updated
    2008-02-05 v1
  • Checksum
    FD6204F78B83B9AC
MGEKSAVHQQKQPPYDGLCNYAQKITSCFGLDVAHTQESHHQTEKPLIRCAKCGELCKGEVLRVQAKHFHIKCFTCKVCGCDLAQGGFFMKNGEYLCTLDYQRIHGTRCNICGEFVEGEVVTALGKTYHPTCFVCTICKRPFPAGDRVTFNGKDCLCQYCAEPMSPGPTKDVVGPSSEYEKKNSKSCAGCGRDIKNGQALLALERQWHLGCFKCKACAKVLTGEYISKDGAPFCERDYQLQFGVQCEACQQFITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPSCKHSPRGEERQRPTRSSSESICSRPGSSIPSSPGHTIYAKVDNEILDYRDLAAIPKVKAIYDIERPDLINYEPLYTTSLDESEERESVAELQSSRRESSPMPDDRTRSPTPSAEGYYDMRERILHRSTSQGSIGSPIYSRHNYTPTLSRSPQHFHRPGTEPSSGRSSPGSSTPPLLLTPKHFHLPDQGMNIYRKPPIYKQHDGRRRSKEEDEEEIQKRRQIQEEHLNKIQSGLGKMILKEEMEKEKIRERHARSLSAQRYEHGSNQSSPSKTGSLPGYGRNGLHRPQSTDFTQYNSYGDVCGGMREFQPMHDGHRTPTRMDRGVSMPNMLEPKVYPYEMLIITSRSRSKLPRDVDRTRLERHLAPEVFFEIFGMEIQEFNRLPLWKRNELKKKAKLF

Computationally mapped potential isoform sequences

There are 15 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A8M9QJF9A0A8M9QJF9_DANREablim1a803
A0A8M3BEV3A0A8M3BEV3_DANREablim1a777
A0A8M6Z9H1A0A8M6Z9H1_DANREablim1a751
A0A8M9QN76A0A8M9QN76_DANREablim1a754
A0A8M6Z923A0A8M6Z923_DANREablim1a702
A0A8M9PXI2A0A8M9PXI2_DANREablim1a797
A0A8M9PXI8A0A8M9PXI8_DANREablim1a726
A0A8M9Q9F1A0A8M9Q9F1_DANREablim1a794
A0A8M9Q9F5A0A8M9Q9F5_DANREablim1a724
A0A8M3B5I2A0A8M3B5I2_DANREablim1a779
A0A8M3B896A0A8M3B896_DANREablim1a788
A0A8M6Z1J7A0A8M6Z1J7_DANREablim1a749
A0A8M9QF47A0A8M9QF47_DANREablim1a769
A0A8M3AZG5A0A8M3AZG5_DANREablim1a739
A0A8M9QJG3A0A8M9QJG3_DANREablim1a752

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias312-330Polar residues
Compositional bias375-399Basic and acidic residues
Compositional bias422-470Polar residues
Compositional bias498-521Basic and acidic residues
Compositional bias554-571Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
BC155652
EMBL· GenBank· DDBJ
AAI55653.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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