A8N0V3 · A8N0V3_COPC7

Function

function

May be involved in the turnover of nuclear polyadenylated (pA+) RNA.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular Functionmetal ion binding
Molecular FunctionRNA binding
Biological ProcessmRNA processing

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • RRM domain-containing protein

Gene names

    • ORF names
      CC1G_08650

Organism names

Accessions

  • Primary accession
    A8N0V3

Proteomes

Organism-specific databases

Subcellular Location

Interaction

Subunit

Associated with the spliceosome.

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, compositional bias, domain, zinc finger.

Type
IDPosition(s)Description
Region80-162Disordered
Compositional bias98-114Polar residues
Compositional bias117-135Basic and acidic residues
Domain184-212C3H1-type
Zinc finger184-212C3H1-type
Region244-309Disordered
Compositional bias292-307Pro residues
Region330-394Disordered
Compositional bias355-370Polar residues
Domain397-469RRM
Compositional bias495-516Polar residues
Region495-528Disordered
Region578-632Disordered
Compositional bias600-615Basic and acidic residues
Region647-690Disordered
Compositional bias762-791Polar residues
Region762-827Disordered
Compositional bias794-816Basic and acidic residues

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    827
  • Mass (Da)
    88,179
  • Last updated
    2010-08-10 v2
  • Checksum
    257D707A6DB4B0F5
MIFDPASAPHLKPWLVRTLEPICDAEPGALADYILALLKHNVPEPEMRKELQVQLEEFLENECKSFIDTLFTVLRTKSYLPYSTNPPSPPPANDEGKSTPLDGTTTSGAAGPSSDRTRKRSFGDDERDTRPSKGPRLSADGDFSRYGNGRADQQWGGGRQGMVQEGAAYGGQMNGRRQGYQPPGQKRGICRDYHNHGFCARGETCKYSHGDDAVIPSQLYPMVPPMMPFNYLYNMFNAQQPYDPNDARIDGHAGGPRQHQRAPIMPREGGAHPHASGELPVIQDLTPSAPTDPNAPQKPPMPQQPSMANMSIPPQLMAMMPGIDPSMFAAGMPPFAGPPMDPSGNMPPGSDATAPQGPPSNQTNPNFRGRGGPSNRGRGGSFGADASSFRPNRRGDKTLVVEKIPEDKLSLDSITSWFKKFGEVTNVAVDPRGGKALVSFATHEEARAAWKSEDAVFNNRFVKVFWHKPMEGHGQVGQRALAASASLVANLNAKETGGTQAGSSSSTASQAGASASASPAPAAAPKKSTQSSAAAALAAKQELLEKQITEQKALMNELTGATAERKKEIMARLRKLNEEMTTAKDTPTPPPPSKKPTPESTDAKGQDKDTEMQPPEGEATGEETTEQLKAKLERLKAEAASLGIESADASGGYSGYRGGYRGRGRGRGFYRGGPAMRGGPPRGSLKLDNRPKKLLVKGANGESEVQHVKDWYESLGQVENIETLDGGDVLVSFRTRAAAEQGLAKGTSIPGIPNKLTITWHVSKSPAPSTTPAPSSSKPTGDATGSSTSMAVDKDPGAEEDGGRSPPRHEEEEVGGWGGYDDGMGML

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias98-114Polar residues
Compositional bias117-135Basic and acidic residues
Compositional bias292-307Pro residues
Compositional bias355-370Polar residues
Compositional bias495-516Polar residues
Compositional bias600-615Basic and acidic residues
Compositional bias762-791Polar residues
Compositional bias794-816Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AACS02000001
EMBL· GenBank· DDBJ
EAU93337.2
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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