A7XWJ3 · A7XWJ3_9HIV2

Function

Features

Showing features for dna binding.

129320406080100120140160180200220240260280
TypeIDPosition(s)Description
DNA binding223-270Integrase-type

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular FunctionDNA binding
Molecular Functionendonuclease activity
Molecular FunctionRNA stem-loop binding
Molecular FunctionRNA-directed DNA polymerase activity
Molecular Functionzinc ion binding
Biological ProcessDNA integration
Biological ProcessDNA recombination
Biological Processsymbiont entry into host cell

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Integrase

Gene names

    • Name
      pol

Organism names

Accessions

  • Primary accession
    A7XWJ3

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain3-44Integrase-type
Domain53-204Integrase catalytic
Domain223-270Integrase-type

Keywords

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    293
  • Mass (Da)
    33,037
  • Last updated
    2007-10-23 v1
  • Checksum
    A316119898BE4C4B
FLERIEPAQEEHEKYHSNVKELSHKFGLPNLVAKQIVNTCAQCQQKGEAIHGQVDAAVGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQETGRHTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQIDRIREQANTVETIVLMAVHCMNFKRRGGIGDMTPAERLINMITTEQEIQFLQAKNSKLKNFRVYFREGRDQLWKGPGELLWKGDGAVIVKVGTDIKVVPRRKAKIIRDYGGRKEMDSSPNLEGAREDGEVA

Features

Showing features for non-terminal residue.

TypeIDPosition(s)Description
Non-terminal residue1

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
EU100470
EMBL· GenBank· DDBJ
ABU88871.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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