A7FK27 · RLMC_YERP3

Function

function

Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA.

Catalytic activity

Features

Showing features for binding site, active site.

137650100150200250300350
Type
IDPosition(s)Description
Binding site3[4Fe-4S] cluster (UniProtKB | ChEBI)
Binding site11[4Fe-4S] cluster (UniProtKB | ChEBI)
Binding site14[4Fe-4S] cluster (UniProtKB | ChEBI)
Binding site87[4Fe-4S] cluster (UniProtKB | ChEBI)
Binding site212S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site241S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site262S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site307S-adenosyl-L-methionine (UniProtKB | ChEBI)
Active site334Nucleophile

GO annotations

AspectTerm
Molecular Function4 iron, 4 sulfur cluster binding
Molecular Functioniron ion binding
Molecular FunctionrRNA (uridine-C5-)-methyltransferase activity
Biological ProcessrRNA base methylation

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
  • EC number
  • Alternative names
    • 23S rRNA(m5U747)-methyltransferase

Gene names

    • Name
      rlmC
    • Synonyms
      rumB
    • Ordered locus names
      YpsIP31758_2640

Organism names

Accessions

  • Primary accession
    A7FK27

Proteomes

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_10000630101-37623S rRNA (uracil747-C5)-methyltransferase RlmC

Structure

Family & Domains

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    376
  • Mass (Da)
    42,088
  • Last updated
    2007-09-11 v1
  • Checksum
    1EE2E1A36083A0A3
MHCAQYAAGRCRSCQWLDKPYPQQLADKQHHLESLLAGHAVTQWLALVFGRESAFRNKAKMVVSGSVERPLLGMLHRDGTPVDLCACPLYPPSFEPVFTVLKTFIARAGLTPYNVARKRGELKFLLLTESTYNGELMLRFVLRSETKLAQLTAALPWLQQQLPQLAVISANIQPVHMAILEGEREIPLTEQQALPERFNQVPLYIRPQSFFQTNPPVAASLYATARQWVQEHEVHSMWDLFCGVGGFGLHCAGPETQLTGIEISAEAIACARQSAEQLGLKNVSFAALDSTRFATAEAQIPELVLVNPPRRGIGRELCDYLSQMAPKFILYSSCNAETMAKDISLLAGYHIERVQLFDMFPHTSHYEVLTLLALRR

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP000720
EMBL· GenBank· DDBJ
ABS48705.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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