A6ZIK2 · A6ZIK2_THEAQ

  • Protein
    RNA 2',3'-cyclic phosphodiesterase
  • Gene
    ligT
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    2/5

Function

function

Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'-phosphomonoester.

Features

Showing features for active site.

119720406080100120140160180
TypeIDPosition(s)Description
Active site39Proton donor
Active site129Proton acceptor

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular Function2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
Molecular Functionligase activity
Molecular FunctionRNA 2',3'-cyclic 3'-phosphodiesterase activity

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    RNA 2',3'-cyclic phosphodiesterase
  • EC number
  • Short names
    RNA 2',3'-CPDase

Gene names

    • Name
      ligT
    • ORF names
      BVI061214_00967

Organism names

  • Taxonomic identifier
  • Organism
  • Strains
    • NTU103
    • ATCC 25104 / DSM 625 / JCM 10724 / NBRC 103206 / NCIMB 11243 / YT-1
    • YT-1
  • Taxonomic lineage
    Bacteria > Deinococcota > Deinococci > Thermales > Thermaceae > Thermus

Accessions

  • Primary accession
    A6ZIK2

Proteomes

Family & Domains

Features

Showing features for domain, motif.

TypeIDPosition(s)Description
Domain7-89Phosphoesterase HXTX
Motif39-42HXTX 1
Domain104-170Phosphoesterase HXTX
Motif129-132HXTX 2

Sequence similarities

Belongs to the 2H phosphoesterase superfamily. ThpR family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    197
  • Mass (Da)
    22,200
  • Last updated
    2007-08-21 v1
  • Checksum
    7D7899348A989319
MRLFYAVFLPEDVRRALEAAQEKLSRYKGWKAVPPHQLHLTLLFLGERPEGDLEDLIALGHRLGRKTPPFVAGLRGTGYFPNEGTPRVWFAKAEGEGFNLLARGLRDGVREVLGEEALKAEGDRAFKPHITLARRKAPAPRVPPVVFGLTWPVESFALVRSELKPRGPVYTILEKFPLRGEHGREQEEVAGKRPQDH

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
EF681139
EMBL· GenBank· DDBJ
ABS00960.1
EMBL· GenBank· DDBJ
Genomic DNA
LHCI01000106
EMBL· GenBank· DDBJ
KOX89786.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp