A6IIQ9 · A6IIQ9_RAT
- ProteinRING-type E3 ubiquitin transferase
- GeneTopors
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids1042 (go to sequence)
- Protein existencePredicted
- Annotation score5/5
Function
Catalytic activity
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameRING-type E3 ubiquitin transferase
- EC number
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Rattus
Accessions
- Primary accessionA6IIQ9
Proteomes
Organism-specific databases
Subcellular Location
Family & Domains
Features
Showing features for region, domain, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-41 | Disordered | ||||
Sequence: MGSQPPPLGSPLSREEGEAPPLAPAEEGRRRSRRVRLRGSC | ||||||
Domain | 104-143 | RING-type | ||||
Sequence: CPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCK | ||||||
Region | 440-476 | Disordered | ||||
Sequence: LNSSDSSDEELVSGGAASQIQGVQANDDVNNDSDSSS | ||||||
Region | 495-693 | Disordered | ||||
Sequence: LVELSSDSEELGSYEKMETVKTQEQEQSYSSGDSDASRASSPRSVLGKDEQMGKSHCDSDTRINSKKEEKRSTSLSTPRDSSSTRGDRACSPYNHRHRKGGRSRSSDSRSQSRSGHDQRNHRKHHGKKRLKNKRSRSRESSSKPRARKDKKRSRTRDSSWSRRSQTLSLSSGSTSRSRSRSSDHGKRRSRSRNRDRYYL | ||||||
Compositional bias | 517-535 | Polar residues | ||||
Sequence: QEQEQSYSSGDSDASRASS | ||||||
Compositional bias | 543-569 | Basic and acidic residues | ||||
Sequence: DEQMGKSHCDSDTRINSKKEEKRSTSL | ||||||
Compositional bias | 610-630 | Basic residues | ||||
Sequence: HDQRNHRKHHGKKRLKNKRSR | ||||||
Compositional bias | 654-672 | Polar residues | ||||
Sequence: WSRRSQTLSLSSGSTSRSR | ||||||
Region | 714-950 | Disordered | ||||
Sequence: RDGYESSYRRRTLSRAHYSRQSSSPEFRIQSFSERTNARRKNHSERKYYYYERHRSRSVSSNRSRTTSAVPDRMRNEKPGGKRKYKTRHLEDTNEEAQPSRAFASRVKESHYQKPSKLDGGSKDESDSFSDSRPSDRETKHKRRKRRARSLSVEIVYEGKATDTSKHHKKKKKKHKKKHRKHHGDNTSRSPVVITIDSDSDGDAGVKASVECSQSSLPQPGQDEVSTPSSEAFETKD | ||||||
Compositional bias | 730-745 | Polar residues | ||||
Sequence: HYSRQSSSPEFRIQSF | ||||||
Compositional bias | 746-772 | Basic and acidic residues | ||||
Sequence: SERTNARRKNHSERKYYYYERHRSRSV | ||||||
Compositional bias | 783-809 | Basic and acidic residues | ||||
Sequence: VPDRMRNEKPGGKRKYKTRHLEDTNEE | ||||||
Compositional bias | 820-851 | Basic and acidic residues | ||||
Sequence: VKESHYQKPSKLDGGSKDESDSFSDSRPSDRE | ||||||
Compositional bias | 878-898 | Basic residues | ||||
Sequence: SKHHKKKKKKHKKKHRKHHGD | ||||||
Compositional bias | 922-947 | Polar residues | ||||
Sequence: SVECSQSSLPQPGQDEVSTPSSEAFE | ||||||
Compositional bias | 975-1036 | Polar residues | ||||
Sequence: STSQAVESSESPPVSVEQTLDVREDSTFASDVESQSSNASIPTEPSRPLPSPRTSLSSVSPG | ||||||
Region | 975-1042 | Disordered | ||||
Sequence: STSQAVESSESPPVSVEQTLDVREDSTFASDVESQSSNASIPTEPSRPLPSPRTSLSSVSPGRDCDMS |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,042
- Mass (Da)117,793
- Last updated2023-06-28 v1
- Checksum4CDFCF601719E6CC
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 517-535 | Polar residues | ||||
Sequence: QEQEQSYSSGDSDASRASS | ||||||
Compositional bias | 543-569 | Basic and acidic residues | ||||
Sequence: DEQMGKSHCDSDTRINSKKEEKRSTSL | ||||||
Compositional bias | 610-630 | Basic residues | ||||
Sequence: HDQRNHRKHHGKKRLKNKRSR | ||||||
Compositional bias | 654-672 | Polar residues | ||||
Sequence: WSRRSQTLSLSSGSTSRSR | ||||||
Compositional bias | 730-745 | Polar residues | ||||
Sequence: HYSRQSSSPEFRIQSF | ||||||
Compositional bias | 746-772 | Basic and acidic residues | ||||
Sequence: SERTNARRKNHSERKYYYYERHRSRSV | ||||||
Compositional bias | 783-809 | Basic and acidic residues | ||||
Sequence: VPDRMRNEKPGGKRKYKTRHLEDTNEE | ||||||
Compositional bias | 820-851 | Basic and acidic residues | ||||
Sequence: VKESHYQKPSKLDGGSKDESDSFSDSRPSDRE | ||||||
Compositional bias | 878-898 | Basic residues | ||||
Sequence: SKHHKKKKKKHKKKHRKHHGD | ||||||
Compositional bias | 922-947 | Polar residues | ||||
Sequence: SVECSQSSLPQPGQDEVSTPSSEAFE | ||||||
Compositional bias | 975-1036 | Polar residues | ||||
Sequence: STSQAVESSESPPVSVEQTLDVREDSTFASDVESQSSNASIPTEPSRPLPSPRTSLSSVSPG |
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CH473962 EMBL· GenBank· DDBJ | EDL98629.1 EMBL· GenBank· DDBJ | Genomic DNA |