A6HKZ3 · A6HKZ3_RAT
- ProteinBifunctional arginine demethylase and lysyl-hydroxylase JMJD6
- GeneJmjd6
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids403 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
Catalytic activity
- 2 2-oxoglutarate + N(omega),N(omega)'-dimethyl-L-arginyl-[protein] + 2 O2 = 2 CO2 + 2 formaldehyde + L-arginyl-[protein] + 2 succinate
- 2-oxoglutarate + L-lysyl-[protein] + O2 = (5S)-5-hydroxy-L-lysyl-[protein] + CO2 + succinate
- 2-oxoglutarate + N(omega),N(omega)'-dimethyl-L-arginyl-[protein] + O2 = CO2 + formaldehyde + N(omega)-methyl-L-arginyl-[protein] + succinate
- 2-oxoglutarate + a 5'-end methyltriphosphate-guanosine-ribonucleotide-snRNA + O2 = a 5'-end triphospho-guanosine-ribonucleotide-snRNA + CO2 + formaldehyde + H+ + succinate
Cofactor
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | nucleus | |
Molecular Function | histone H4R3 demethylase activity | |
Molecular Function | P-TEFb complex binding | |
Biological Process | phagocytosis |
Names & Taxonomy
Protein names
- Recommended nameBifunctional arginine demethylase and lysyl-hydroxylase JMJD6
- Alternative names
Gene names
Organism names
- Organism
- Strains
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Rattus
Accessions
- Primary accessionA6HKZ3
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Family & Domains
Features
Showing features for domain, compositional bias, region.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 141-305 | JmjC | ||||
Sequence: PKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTNTPRELIKVTREEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVRGR | ||||||
Compositional bias | 336-360 | Polar residues | ||||
Sequence: TGIASDSSSDSSSSSSSSSSDSDSE | ||||||
Region | 336-403 | Disordered | ||||
Sequence: TGIASDSSSDSSSSSSSSSSDSDSECESGSEGDGTTHRRKKRRTCSMVGNGDTTSQDDCVSKERSSSR |
Sequence similarities
Belongs to the JMJD6 family.
Family and domain databases
Sequence
- Sequence statusComplete
- Length403
- Mass (Da)46,540
- Last updated2023-06-28 v1
- Checksum629EE773BD0DB737
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 336-360 | Polar residues | ||||
Sequence: TGIASDSSSDSSSSSSSSSSDSDSE |
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CH473948 EMBL· GenBank· DDBJ | EDM06699.1 EMBL· GenBank· DDBJ | Genomic DNA |