A5HBY0 · A5HBY0_9GEMI

Function

function

Binds the genomic viral ssDNA and shuttles it into and out of the cell nucleus.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componenthost cell
Cellular Componenthost cell nucleus
Cellular ComponentT=1 icosahedral viral capsid
Molecular FunctionDNA binding
Molecular Functionmetal ion binding
Molecular Functionstructural molecule activity
Biological Processsymbiont entry into host cell
Biological Processviral penetration into host nucleus

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Capsid protein
  • Alternative names
    • Coat protein

Gene names

    • Name
      AV1
    • Synonyms
      av1
      , V1

Organism names

  • Taxonomic identifier
  • Strains
    • G6
    • XJ01
    • Okra06
    • GX1
    • FC3
  • Taxonomic lineage
    Viruses > Monodnaviria > Shotokuvirae > Cressdnaviricota > Repensiviricetes > Geplafuvirales > Geminiviridae > Begomovirus

Accessions

  • Primary accession
    A5HBY0

Subcellular Location

Keywords

Structure

3D structure databases

Family & Domains

Sequence similarities

Belongs to the geminiviridae capsid protein family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    256
  • Mass (Da)
    29,674
  • Last updated
    2007-06-12 v1
  • MD5 Checksum
    B6DB974A8C43BC140203E82DC2982CA9
MSKRAADIVISTPASKVRRRLNFGSPYTNRVAVPIVRVTKQQAWTNRPMNRKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHRIGKRFCVKSVYVLGKIWMDENIKTRNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVTN

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
EF465535
EMBL· GenBank· DDBJ
ABQ10625.1
EMBL· GenBank· DDBJ
Genomic DNA
FJ770370
EMBL· GenBank· DDBJ
ACN94456.1
EMBL· GenBank· DDBJ
Genomic DNA
GQ503175
EMBL· GenBank· DDBJ
ACX31608.1
EMBL· GenBank· DDBJ
Genomic DNA
GQ924756
EMBL· GenBank· DDBJ
ADK24725.1
EMBL· GenBank· DDBJ
Genomic DNA
HQ455349
EMBL· GenBank· DDBJ
AEG42028.1
EMBL· GenBank· DDBJ
Genomic DNA
HQ455355
EMBL· GenBank· DDBJ
AEG42037.1
EMBL· GenBank· DDBJ
Genomic DNA
HQ455356
EMBL· GenBank· DDBJ
AEG42041.1
EMBL· GenBank· DDBJ
Genomic DNA
HQ455357
EMBL· GenBank· DDBJ
AEG42045.1
EMBL· GenBank· DDBJ
Genomic DNA
HQ455363
EMBL· GenBank· DDBJ
AEG42054.1
EMBL· GenBank· DDBJ
Genomic DNA
JQ317603
EMBL· GenBank· DDBJ
AFG73151.1
EMBL· GenBank· DDBJ
Genomic DNA
JQ424826
EMBL· GenBank· DDBJ
AFJ00778.1
EMBL· GenBank· DDBJ
Genomic DNA
JQ963625
EMBL· GenBank· DDBJ
AFN54982.1
EMBL· GenBank· DDBJ
Genomic DNA
JQ963629
EMBL· GenBank· DDBJ
AFN54994.1
EMBL· GenBank· DDBJ
Genomic DNA
JQ963631
EMBL· GenBank· DDBJ
AFN55000.1
EMBL· GenBank· DDBJ
Genomic DNA
JX286656
EMBL· GenBank· DDBJ
AFS44526.1
EMBL· GenBank· DDBJ
Genomic DNA
JX286664
EMBL· GenBank· DDBJ
AFS44554.1
EMBL· GenBank· DDBJ
Genomic DNA
JX914662
EMBL· GenBank· DDBJ
AGA96095.1
EMBL· GenBank· DDBJ
Genomic DNA
KF413618
EMBL· GenBank· DDBJ
AGS12461.1
EMBL· GenBank· DDBJ
Genomic DNA
KF766949
EMBL· GenBank· DDBJ
AHG31028.1
EMBL· GenBank· DDBJ
Genomic DNA
KF766951
EMBL· GenBank· DDBJ
AHG31034.1
EMBL· GenBank· DDBJ
Genomic DNA
KF766953
EMBL· GenBank· DDBJ
AHG31040.1
EMBL· GenBank· DDBJ
Genomic DNA
KP762786
EMBL· GenBank· DDBJ
AJM93613.1
EMBL· GenBank· DDBJ
Genomic DNA
KX068709
EMBL· GenBank· DDBJ
APL98095.1
EMBL· GenBank· DDBJ
Genomic DNA
KY432574
EMBL· GenBank· DDBJ
APU91930.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

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