A4QQE0 · CLP1_PYRO7
- ProteinmRNA cleavage and polyadenylation factor CLP1
- GeneCLP1
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids455 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
function
Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation.
Features
Showing features for binding site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Binding site | 28 | ATP (UniProtKB | ChEBI) | |||
Binding site | 67 | ATP (UniProtKB | ChEBI) | |||
Binding site | 137-142 | ATP (UniProtKB | ChEBI) | |||
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | mRNA cleavage factor complex | |
Molecular Function | ATP binding | |
Molecular Function | polynucleotide 5'-hydroxyl-kinase activity | |
Biological Process | mRNA 3'-end processing | |
Biological Process | tRNA splicing, via endonucleolytic cleavage and ligation |
Keywords
- Biological process
- Ligand
Names & Taxonomy
Protein names
- Recommended namemRNA cleavage and polyadenylation factor CLP1
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Fungi > Dikarya > Ascomycota > Pezizomycotina > Sordariomycetes > Sordariomycetidae > Magnaporthales > Pyriculariaceae > Pyricularia
Accessions
- Primary accessionA4QQE0
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Chain | PRO_0000375209 | 1-455 | mRNA cleavage and polyadenylation factor CLP1 | ||
Interaction
Subunit
Component of a pre-mRNA cleavage factor complex. Interacts directly with PCF11.
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for region.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Region | 112-131 | Disordered | |||
Sequence similarities
Belongs to the Clp1 family. Clp1 subfamily.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length455
- Mass (Da)48,583
- Last updated2012-01-25 v2
- Checksum934321CF66D799AE
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CM001236 EMBL· GenBank· DDBJ | EHA46800.1 EMBL· GenBank· DDBJ | Genomic DNA |