A4FU69 · EFCB5_HUMAN
- ProteinEF-hand calcium-binding domain-containing protein 5
- GeneEFCAB5
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids1503 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
Features
Showing features for binding site.
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Molecular Function | calcium ion binding |
Keywords
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameEF-hand calcium-binding domain-containing protein 5
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionA4FU69
- Secondary accessions
Proteomes
Organism-specific databases
Disease & Variants
Features
Showing features for natural variant.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Natural variant | VAR_038343 | 237 | in dbSNP:rs9897794 | |||
Sequence: L → V | ||||||
Natural variant | VAR_038344 | 278 | in dbSNP:rs4795524 | |||
Sequence: I → K | ||||||
Natural variant | VAR_038345 | 561 | in dbSNP:rs9900546 | |||
Sequence: R → S | ||||||
Natural variant | VAR_048644 | 1145 | in dbSNP:rs9894896 | |||
Sequence: A → D | ||||||
Natural variant | VAR_048645 | 1252 | in dbSNP:rs4499292 | |||
Sequence: V → A | ||||||
Natural variant | VAR_048646 | 1274 | in dbSNP:rs35724168 | |||
Sequence: R → T |
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 1,644 variants from UniProt as well as other sources including ClinVar and dbSNP.
Organism-specific databases
Miscellaneous
Genetic variation databases
PTM/Processing
Features
Showing features for chain, modified residue.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000315836 | 1-1503 | EF-hand calcium-binding domain-containing protein 5 | |||
Sequence: MNESASQEELRPAQENRKEDKERKWNLTEVKELHETLQSVPDVPVKEDTNSVVEKAMDEIKSQELNLEGQRKISPGSIKDSKTEASGNIAIRKSAKVIFALDETELKSKPEHTWKKNLFERMEARAQAMQQKIIDKENLKKELEKKAEKKLPRDNLAKEWFNTDSMTLNNTAYLLDKLLPTLVPGVENMLTQVEKKKVLTEADTPSKFDPINYLGEYLIRNNPNYIKDPGMSGYQRLMKEVTEDLKIYVPDTICNRVSKMKENVKQNRKQRESIDKIIVKVANTRKQALQEQFDEWILDPKGMIPKSVIQNVLQEFFQNPDFKLGSHCKQLDITDSTEPRLNKMEFTEYISSHIKDLKSEMFEELLKHLCHSADEFREVIKADMRRQMFAELFLHCDHGKVGFLDRQRTLALLELFYDHSSQMLRSLLRNPRQWPFIEFEEINLTELWGDMDNQKHIYEGFDKVLLEMNTLLSANHASKTQSKLLESPDQPKLNEQRTSTPSPNPPEQQRGVTAEQGPQRISIEEQQQGKKPTAEQELYIESVIEPGTHTESTLEQGSSRRLLTEQETHRESTTEQGQHKGSIEGQGPRRVSVSEQGSSRESVAEQGSRRESIAEQDRHKGSVAEQGSRRMSAAEQGSLRESVIEEPYQKSEQGPYGEIISEEQEDIGSTSQSRKDSILKSTKYGEPITSEYIEVPLQEKRSWEQTYEEEIFLSSELQEEVPTLSRKDHFPETTKKEVQKDKPCEPKSQKIEGKSWSGEFFTCNWKMKYVTFEDEEQANLIYGNSRFTDLHSIIRNIQSCKEVKGRTAFNGVSFNLLQFVQLLETFVGEDAPLSVSETLTSFFKEGYVETEQEKMNALEQFSQNAFQVRQRLLLEAIFQKWDSDGSGFLDLKEVDELLYTYKEGMEKESMKKAKLHIQFPKPHPGHEVRLSSKQFQNYIELVVSELRGNEDQVLESVVEFLMNALERSHIESLRNSARRKWLHQIQCAAETSGVSLEPVYSETFKALMQDAEAHGNKKISAHISLLEENLLLPEKGNVLLRNVACTLDDAQFVLNRVLYRDMKGISFTVVDEGKPIHVPQVQYHGNIFFWNQSRNKHDYNGSFLALPLQDAYMRIFGVLAVDTLRDPHEINIFLPHEIRFYQGVANVFSTAYHYVHSREHILHIVITGIGWLYDVTSSITSITTYFVEPSPAQDSDYVLRNMMVTGQLGLTEIHKNPPTIHRKSCIFRDFLFKCTDSSEVVLASACGETHIVVPLRERTGEALGVLDFNIGQNRMLLCQEYKDLQKMMKVVQVACYEILGEFSGEIKKKYILEIENVREVQRAGILFFRIMLLELQESIQLLNSMEFVSLLLYDHTLVTEPNSPQDSKSMELEANVKLVRDILKAVILFFHPELEFSSDFGSWDKCKFYVNKYLVNNICAFDPTAKHVEVNVQLIDEYIRDHSRTEVWKFGNVVIEHLYHWIHICSALMKITKQLNSGITPPLPSKTDNYMYAKMPGEGLQEK | ||||||
Modified residue | 77 | Phosphoserine | ||||
Sequence: S |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-23 | Disordered | ||||
Sequence: MNESASQEELRPAQENRKEDKER | ||||||
Region | 477-518 | Disordered | ||||
Sequence: ASKTQSKLLESPDQPKLNEQRTSTPSPNPPEQQRGVTAEQGP | ||||||
Region | 544-656 | Disordered | ||||
Sequence: IEPGTHTESTLEQGSSRRLLTEQETHRESTTEQGQHKGSIEGQGPRRVSVSEQGSSRESVAEQGSRRESIAEQDRHKGSVAEQGSRRMSAAEQGSLRESVIEEPYQKSEQGPY | ||||||
Compositional bias | 546-561 | Polar residues | ||||
Sequence: PGTHTESTLEQGSSRR | ||||||
Compositional bias | 562-577 | Basic and acidic residues | ||||
Sequence: LLTEQETHRESTTEQG | ||||||
Compositional bias | 589-603 | Polar residues | ||||
Sequence: RRVSVSEQGSSRESV | ||||||
Compositional bias | 604-625 | Basic and acidic residues | ||||
Sequence: AEQGSRRESIAEQDRHKGSVAE | ||||||
Compositional bias | 730-749 | Basic and acidic residues | ||||
Sequence: FPETTKKEVQKDKPCEPKSQ | ||||||
Region | 730-750 | Disordered | ||||
Sequence: FPETTKKEVQKDKPCEPKSQK | ||||||
Domain | 869-904 | EF-hand | ||||
Sequence: RQRLLLEAIFQKWDSDGSGFLDLKEVDELLYTYKEG |
Phylogenomic databases
Family and domain databases
Sequence & Isoforms
- Sequence statusComplete
This entry describes 6 isoforms produced by Alternative splicing.
A4FU69-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Length1,503
- Mass (Da)173,404
- Last updated2012-10-31 v3
- Checksum907EED07E7C17EB7
A4FU69-2
- Name2
A4FU69-3
- Name3
- Differences from canonical
- 789-912: Missing
A4FU69-4
- Name4
- Differences from canonical
- 913-1440: Missing
A4FU69-5
- Name5
A4FU69-6
- Name6
Computationally mapped potential isoform sequences
There are 4 potential isoforms mapped to this entry
Sequence caution
Features
Showing features for alternative sequence, sequence conflict, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Alternative sequence | VSP_047184 | 1-56 | in isoform 5 | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_055510 | 1-343 | in isoform 6 | |||
Sequence: Missing | ||||||
Sequence conflict | 324 | in Ref. 1; BX648689 | ||||
Sequence: L → P | ||||||
Sequence conflict | 374 | in Ref. 1; BX648689 | ||||
Sequence: D → E | ||||||
Sequence conflict | 429 | in Ref. 4; BAC87284 | ||||
Sequence: R → Q | ||||||
Compositional bias | 546-561 | Polar residues | ||||
Sequence: PGTHTESTLEQGSSRR | ||||||
Compositional bias | 562-577 | Basic and acidic residues | ||||
Sequence: LLTEQETHRESTTEQG | ||||||
Compositional bias | 589-603 | Polar residues | ||||
Sequence: RRVSVSEQGSSRESV | ||||||
Compositional bias | 604-625 | Basic and acidic residues | ||||
Sequence: AEQGSRRESIAEQDRHKGSVAE | ||||||
Compositional bias | 730-749 | Basic and acidic residues | ||||
Sequence: FPETTKKEVQKDKPCEPKSQ | ||||||
Alternative sequence | VSP_030732 | 789-912 | in isoform 3 | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_047185 | 861-912 | in isoform 5 and isoform 6 | |||
Sequence: FSQNAFQVRQRLLLEAIFQKWDSDGSGFLDLKEVDELLYTYKEGMEKESMKK → VSLCRQAGVQWRNCSSLQPPTPGLKRSSHHRLLSNWDYRERRKFFPLETKFP | ||||||
Alternative sequence | VSP_030734 | 913-926 | in isoform 2 | |||
Sequence: AKLHIQFPKPHPGH → GLTLSPGWSAVAQL | ||||||
Alternative sequence | VSP_030733 | 913-1440 | in isoform 4 | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_047186 | 913-1503 | in isoform 5 and isoform 6 | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_030735 | 927-1503 | in isoform 2 | |||
Sequence: Missing | ||||||
Sequence conflict | 962 | in Ref. 4; BAC87284 | ||||
Sequence: M → I | ||||||
Sequence conflict | 1386 | in Ref. 1; CAD38767 | ||||
Sequence: V → G |
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AK128126 EMBL· GenBank· DDBJ | BAC87284.1 EMBL· GenBank· DDBJ | mRNA | Different initiation | |
AK299608 EMBL· GenBank· DDBJ | BAG61537.1 EMBL· GenBank· DDBJ | mRNA | ||
AK303060 EMBL· GenBank· DDBJ | BAG64177.1 EMBL· GenBank· DDBJ | mRNA | ||
BX648689 EMBL· GenBank· DDBJ | - | mRNA | No translation available. | |
AL833911 EMBL· GenBank· DDBJ | CAD38767.1 EMBL· GenBank· DDBJ | mRNA | ||
AC104982 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC104984 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC104996 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
BC110608 EMBL· GenBank· DDBJ | AAI10609.1 EMBL· GenBank· DDBJ | mRNA | ||
BC110609 EMBL· GenBank· DDBJ | AAI10610.1 EMBL· GenBank· DDBJ | mRNA | ||
BC119807 EMBL· GenBank· DDBJ | AAI19808.1 EMBL· GenBank· DDBJ | mRNA | ||
BC137519 EMBL· GenBank· DDBJ | AAI37520.1 EMBL· GenBank· DDBJ | mRNA |