A1D6X9 · DBP8_NEOFI

Function

function

ATP-binding RNA helicase involved in 40S ribosomal subunit biogenesis and is required for the normal formation of 18S rRNAs through pre-rRNA processing at A0, A1 and A2 sites. Required for vegetative growth (By similarity).

Catalytic activity

Features

Showing features for binding site.

152650100150200250300350400450500
TypeIDPosition(s)Description
Binding site140-147ATP (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular Componentnucleolus
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular FunctionRNA binding
Molecular FunctionRNA helicase activity
Biological ProcessrRNA processing

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    ATP-dependent RNA helicase dbp8
  • EC number

Gene names

    • Name
      dbp8
    • ORF names
      NFIA_066370

Organism names

Accessions

  • Primary accession
    A1D6X9

Proteomes

Organism-specific databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00002817121-526ATP-dependent RNA helicase dbp8

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, compositional bias, motif, domain.

Type
IDPosition(s)Description
Region1-78Disordered
Compositional bias28-44Basic and acidic residues
Motif96-124Q motif
Domain127-306Helicase ATP-binding
Motif249-252DEAD box
Domain338-485Helicase C-terminal

Domain

The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    526
  • Mass (Da)
    57,115
  • Last updated
    2007-01-23 v1
  • Checksum
    CCD71C3474049941
MASPVPSEPVSEDTHDSSSGSEVEQSEISTRAPKRRRLSESSDDSDDSYVAPAPLPTLSRIKKKGAPDAKPAAPAGQDNPVLIRDALEIGLREEASSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSVPMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRPQAIALAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRLLASGPGSMLPDVETCLSALPPSSERQTLLFTATVTPEVRALKNMPRSANKPPVFVTEISTENQGSIPPTLKQTYLKVPLTHREAFLHVLLSTEDNASRPAIIFCNHTKTADLLERMLRRLTHRVTSLHSLLPQSERNANLARFRASAARILVATDVASRGLDIPTVSLVINYDVPRNPDDYVHRVGRTARAGRSGEAITLVGQRDVQLVLAIEERVGRQMEEWSEEGVSIEGRLVRTGVLKEVGEAKREAMGEIDEGRDVLGRKRNKLKKVR

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias28-44Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
DS027690
EMBL· GenBank· DDBJ
EAW21473.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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