A0DK55 · A0DK55_PARTE

Function

Catalytic activity

  • ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)m = (deoxyribonucleotide)n+m + AMP + diphosphate.
    EC:6.5.1.1 (UniProtKB | ENZYME | Rhea)

Cofactor

Mg2+ (UniProtKB | Rhea| CHEBI:18420 )

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentDNA ligase IV complex
Molecular FunctionATP binding
Molecular FunctionDNA binding
Molecular FunctionDNA ligase (ATP) activity
Biological ProcessDNA biosynthetic process
Biological ProcessDNA ligation involved in DNA repair
Biological ProcessDNA recombination
Biological Processdouble-strand break repair via nonhomologous end joining
Biological Processnucleotide-excision repair, DNA gap filling

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA ligase
  • EC number

Gene names

    • ORF names
      GSPATT00017751001

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • Stock d4-2
  • Taxonomic lineage
    Eukaryota > Sar > Alveolata > Ciliophora > Intramacronucleata > Oligohymenophorea > Peniculida > Parameciidae > Paramecium

Accessions

  • Primary accession
    A0DK55

Proteomes

    • Identifier
    • Component
      Partially assembled WGS sequence

Subcellular Location

Keywords

  • Cellular component

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, domain, compositional bias.

TypeIDPosition(s)Description
Region1-23Disordered
Domain377-523ATP-dependent DNA ligase family profile
Compositional bias649-673Basic and acidic residues
Region649-677Disordered
Domain697-787BRCT

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    944
  • Mass (Da)
    110,457
  • Last updated
    2006-11-28 v1
  • Checksum
    5146CA0AC207F263
MQQENFIDEEIQDEEEERREQKEVHEFAKEIKEKVEETNKQNKEQQDQQKVNVNSTVGPIRVKFDVLRCFFDRMSKVRGKKKSELLDVLTQFFFKPPRIPEHTYIIMRLIIPFQDRDRGVYKLQEKNLAKLFRSALGLSDDDYHRMANYKQASMQPYGAPVGDFPMVVHNVIKDYCRKDSIITISEVDSLLDNLVKAQDTKEQELVVVDLIKVCTADEILWIIRIILKDLKIGLKYEKLLQLFHKDAPEYYNATSSLNEVCKEFNVLRIFHAIKPMLAAKKSPEEIRKLIEGKELLVETKFDGERIQCHFTPEVIRFFTRNSNDYTYLYKDKLGDIVRQSVQAQCAILDGEIIVVNKETGDNVRFGLNKTVALSKDVNDDAFGLCYKIFDILYLKTYQGQEVNTMSAPLSTRRSLLQRIIVPIPNQLEVVQAATIKSFEELIQQFDMAIERNQEGIIIKQMDSQYLPNERSTKWVKMKGDYVENMTDNCDLLVIGGYFGTQSHRVETFDEFDRITHFLMGLAQKIDKNQPTNSVILPFVKVGTGFTDNELSTIRNKLRNHWIKKQKPNYIPQNWNPGVNDRPDVYINNPAHSIIFEVKAAEITKSNTFPTDYTLRFPRCYKTRMDKDWYEMMTTQDLSSMINDSQYTKNLKKKNDKEGNDKQTDDERKQPLKKGGAHSKQITIMTEFQGLDPRNITKESNLFVGCEFFIVNLEEDYNKQYLESIVLAQGGTCIQNYIVESVTHVVASIIDFRVNSIIEKFPTTIIRPQWIIECIRRSQLVNIAPRFILFAPLAIMNEVNKFYDRFGDSYFELIDDLALKDICDNMKINETVNQDDLLSLEEELLYQLPKLWIFQHKSFYPYCLNHQISDVELETFKARIIARGGSFVNSIYDEKLDFIILFKNQTFIQNERLKQFFNEKPYIKTTTYTQMMQLIEEQHQMILPS

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias649-673Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CT868474
EMBL· GenBank· DDBJ
CAK83422.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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