A0AAP7J898 · A0AAP7J898_9GAMM

Function

function

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

GO annotations

AspectTerm
Cellular ComponentDNA-directed RNA polymerase complex

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA-directed RNA polymerase subunit beta
  • EC number
  • Short names
    RNAP subunit beta
  • Alternative names
    • RNA polymerase subunit beta
    • Transcriptase subunit beta

Gene names

    • Name
      rpoB
    • ORF names
      HMPREF3114_02945

Organism names

  • Taxonomic identifier
  • Strain
    • HMSC10F07
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Stenotrophomonas

Accessions

  • Primary accession
    A0AAP7J898

Proteomes

Subcellular Location

Keywords

Interaction

Subunit

The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

Family & Domains

Features

Showing features for domain, coiled coil.

Type
IDPosition(s)Description
Domain28-527RNA polymerase beta subunit protrusion
Domain156-227RNA polymerase Rpb2
Domain362-420RNA polymerase Rpb2
Domain450-482RNA polymerase Rpb2
Domain541-608RNA polymerase Rpb2
Domain619-684DNA-directed RNA polymerase beta subunit external 1
Domain747-1306DNA-directed RNA polymerase subunit 2 hybrid-binding
Coiled coil1045-1072
Domain1308-1382RNA polymerase Rpb2

Sequence similarities

Belongs to the RNA polymerase beta chain family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,384
  • Mass (Da)
    154,253
  • Last updated
    2024-10-02 v1
  • Checksum
    2BC26B1F976B4B39
MTSYSFTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQENVDPAKRTDHGLHAALKSVFPIASYSGNAALEYVGYKLGEPVFDERECRQRGMSYGAPLRVTVRLVIYDRESSTKAIKYVKEQEVYLGEIPLMTENGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSILLRALGYSNEEMLAEFFEINTFHINPDEGVQLELVPERLRGETLGFDLADGDKVIVEAGKRITARHIKQLEASGIAALAVPDDYIVGRILSHDVVDASTGELLAQANDEITDEQLQAFRKAGVDAVGTLWVNDLDRGPYLSNTLRIDPTKTQLEALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFERYDLSAVGRMKFNRRVGRKETTGEAVLYDSKYFGERNDEESKRLVAAHGESSDILDVIKVLTEIRNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVYARTNKYGFLETPYRKVVDGKVYDEVEFLSAIEENEYVIAQANALTDAKGTLTEQFVPCRFQGESLLKPPAEVHFMDVSPMQTVSIAAALVPFLEHDDANRALMGANMQRQAVPTLRSQKPLVGTGIERAVARDSGVTVNARRGGEIVQIDAARIVVKVNEEEIVGATDAGVDIYNLVKYTRSNQNTCINQRPLVQVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSERVVEEDRYTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDESGVVYIGAEVRAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQVFTRDGIEKDKRARQIEESEIKRVKKDFDDQFRILEAAIYMRLRSQIVGKVVNGGAGLKKGDVITDAFLDGLKKSDWFALRMKDEDASEAIERAQKQIQAHEKEFERRFADKRGKITAGDDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSNVVPVEDMPYMASGETVDIVLNPLGVPSRMNIGQILEVHLGWAAKGLGRKIQAMLEAQAAVADLRKFLDDIYNHDDTNVANRVDLSQFSDEELLRLARNLTDGVPMATPVFDGATEAEIKRMLELADLPSSGQTQLYDGRTGEAFDRHTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIRSLAINMELEDN

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
LUAA01000033
EMBL· GenBank· DDBJ
OFV00635.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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