A0AAP6RY57 · A0AAP6RY57_9GAMM
- ProteinRibosomal RNA large subunit methyltransferase M
- GenerlmM
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids366 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
function
Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA.
Catalytic activity
- cytidine2498 in 23S rRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine2498 in 23S rRNA + S-adenosyl-L-homocysteine + H+
Features
Showing features for binding site, active site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Binding site | 188 | S-adenosyl-L-methionine (UniProtKB | ChEBI) | |||
Binding site | 221-224 | S-adenosyl-L-methionine (UniProtKB | ChEBI) | |||
Binding site | 240 | S-adenosyl-L-methionine (UniProtKB | ChEBI) | |||
Binding site | 260 | S-adenosyl-L-methionine (UniProtKB | ChEBI) | |||
Binding site | 277 | S-adenosyl-L-methionine (UniProtKB | ChEBI) | |||
Active site | 306 | Proton acceptor | |||
Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameRibosomal RNA large subunit methyltransferase M
- EC number
- Alternative names
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageBacteria > Pseudomonadota > Gammaproteobacteria > Enterobacterales > Pectobacteriaceae > Dickeya
Accessions
- Primary accessionA0AAP6RY57
Proteomes
Subcellular Location
Interaction
Subunit
Monomer.
Structure
Family & Domains
Features
Showing features for domain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Domain | 1-71 | RlmM ferredoxin-like | |||
Domain | 84-164 | Ribosomal RNA large subunit methyltransferase M THUMP-like | |||
Domain | 186-279 | Ribosomal RNA methyltransferase FtsJ | |||
Sequence similarities
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.
Family and domain databases
Sequence
- Sequence statusComplete
- Length366
- Mass (Da)42,153
- Last updated2024-10-02 v1
- Checksum688BB01294019015
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CP069603 EMBL· GenBank· DDBJ | QVH72737.1 EMBL· GenBank· DDBJ | Genomic DNA |