A0AAN0QZ28 · A0AAN0QZ28_9PSED

Function

function

3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.

Catalytic activity

  • Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates.
    EC:3.1.13.1 (UniProtKB | ENZYME | Rhea)

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Ribonuclease R
  • EC number
  • Short names
    RNase R

Gene names

    • Name
      rnr
    • ORF names
      PVLB_02815

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • VLB120
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Accessions

  • Primary accession
    A0AAN0QZ28

Proteomes

Subcellular Location

Cytoplasm

Keywords

Family & Domains

Features

Showing features for domain, region, compositional bias.

Type
IDPosition(s)Description
Domain665-746S1 motif
Region752-858Disordered
Compositional bias769-791Basic and acidic residues
Compositional bias799-816Basic and acidic residues
Compositional bias836-858Basic residues

Sequence similarities

Belongs to the RNR ribonuclease family. RNase R subfamily.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    858
  • Mass (Da)
    96,743
  • Last updated
    2024-10-02 v1
  • Checksum
    D0C9421533CFD09A
MADWQSLDPEAAREAEKYENPIPSRELILQRLADRGEPAAREELAAEFGLYDEDQIEALRRRLRAMERDGQLIYTRRGTYAPVDKLDLICGRVSGHRDGFGFLIPDDGSDDLFLSPSQMRLVFDGDRGLARVSGVDRRGRREGVLVEVISRAHETVVGRYFEEGGIGYVTPDNPKIQQEVLVTAGRNGGAKIGQFVEIKITHWPTPRFQPQGDVIEVIGNYMAPGMEIDVALRSYDIPHVWPQEVIKEARKFRSEVEEKDKEKRVDLRHLPFVTIDGEDARDFDDAVYCEPLGKLRLFSGGWRLYVAIADVSSYVRLGSALDVEAQQRGNSVYFPERVVPMLPEELSNGLCSLNPHVDRLAMVCEMTINKTGQMVDYQFYEGVIHSHARLTYNKVSSMLEHARTREGKALREEYKEVLPDLKNLYNLYKVLVAARHTRGAIDFETQETRIIFGDQRKIAEIRPTVRNDAHKLIEECMLAANVATAEFLQKHGVPALYRVHDGPPPERLEKLRAFLGELGLTLHKGKDPSPKDYQALLASIADRPDFHLIQTVMLRSLSQAVYSTDNNGHFGLNYEAYTHFTSPIRRYPDLLVHRAIRSIIRSKVETPHVKRAGAMSIPKARIYPYDENTLEQLGEQCSMTERRADEATRDVVNWLKCEYMKDRVGETFPGVITAVTGFGLFVELTDIYVEGLVHVSALPGDYYHFDPVHHRLSGERSGRTFRLGDTIEVKVMRVDLDERKIDFEVSEQQLSAPVGRKGRNAAPVADKSEAPKVEAKATPKPRSRKSEAAEAYFPKDAVQRNAEVRKSREMKKALMSEARSSGHASSKSDKGGKSSGKPTKHRKGPSKSGGPRKGKSKP

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias769-791Basic and acidic residues
Compositional bias799-816Basic and acidic residues
Compositional bias836-858Basic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP003961
EMBL· GenBank· DDBJ
AGZ33372.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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