A0A9X3DG24 · A0A9X3DG24_9SPHI

  • Protein
    6-phosphogluconate dehydrogenase, decarboxylating
  • Gene
    gndA
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO2, with concomitant reduction of NADP to NADPH.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Pathway

Carbohydrate degradation; pentose phosphate pathway; D-ribulose 5-phosphate from D-glucose 6-phosphate (oxidative stage): step 3/3.

Features

Showing features for binding site, active site.

Type
IDPosition(s)Description
Binding site107substrate; ligand shared between dimeric partners; in other chain
Binding site133-135substrate; ligand shared between dimeric partners; in other chain
Active site187Proton acceptor
Binding site190-191substrate; ligand shared between dimeric partners; in other chain
Active site194Proton donor
Binding site195substrate; ligand shared between dimeric partners; in other chain
Binding site265substrate; ligand shared between dimeric partners; in other chain
Binding site292substrate; ligand shared between dimeric partners; in other chain
Binding site446substrate; ligand shared between dimeric partners
Binding site452substrate; ligand shared between dimeric partners

GO annotations

AspectTerm
Cellular Componentcytosol
Molecular FunctionNADP binding
Molecular Functionphosphogluconate dehydrogenase (decarboxylating) activity
Biological ProcessD-gluconate catabolic process
Biological Processpentose-phosphate shunt, oxidative branch

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    6-phosphogluconate dehydrogenase, decarboxylating
  • EC number

Gene names

    • Name
      gndA
    • ORF names
      OQZ29_11710

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • DSM 19486
  • Taxonomic lineage
    Bacteria > Bacteroidota > Sphingobacteriia > Sphingobacteriales > Sphingobacteriaceae > Pedobacter

Accessions

  • Primary accession
    A0A9X3DG24

Proteomes

Subcellular Location

Interaction

Subunit

Homodimer.

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain183-4686-phosphogluconate dehydrogenase C-terminal

Sequence similarities

Belongs to the 6-phosphogluconate dehydrogenase family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    471
  • Mass (Da)
    52,233
  • Last updated
    2023-11-08 v1
  • Checksum
    D8D938828B10729D
MSNNESKNYKLGMIGLGTMGRNLLLNMADKGFSVTGYDKDHKMIAKLEEEGKAHNLKGYDDIQAFISSLQTPRTLILLVPAGPIVDSVIAELKPLLSKGDIIIDSGNSHFTDTNRRVDELEKEGLHFFGMGISGGEEGARFGPSMMPGGDKQAYNVVKEVFDAVAAKVGSDPCVTYIGPGASGHFVKMVHNGIEYAIMELIAEVYGVLKNGLGYSNAEIYQVFKKWNEGRLQSFLLEITAEIFLFKDTETQNDLLDQIKDEARSKGTGKWTSEVSMELQLPVPTINEAVSNRDLSKFKALRVSLEEAYGKKENKIDVSVDDLENAFYFSMISAYAQGMHLLVQASKEYQYDLQLQEIAKIWRGGCIIRAKFLEDIYQAYDKNNSLEHLFGDGGIQDIIKSTLNGTRKTISACINAGIGIPAFASTLTYFDTITTARMPSNLIQAQRDFFGAHTFERIDKDGVFHADWNKLS

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JAPJUH010000003
EMBL· GenBank· DDBJ
MCX3265416.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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